Lates calcarifer (barramundi perch): 108885388
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Entry
108885388 CDS
T04895
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108885388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108885388
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
108885388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_IRO3
CHAD
DUF6873
Motif
Other DBs
NCBI-GeneID:
108885388
NCBI-ProteinID:
XP_018535242
UniProt:
A0AAJ7PPL6
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All DBs
Position
LG12:5199627..5202450
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AA seq
182 aa
AA seq
DB search
MKPAEIRLSLQRPLQHTHPDMAPTITAEMTNSQEHLTLTHKLRKPLVEKLRRERINSSIE
QLKSLLGPEFLKQQPDSKLEKADILEMTVCFLTQLQQQQHQAVDSAAVNQGYSRCVQEVA
HFLSKEEVKTQSQRRLLNHFNRLQSSSDKNLREADFSPLSSSVQTSITKDKSPVNSTLWR
PW
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagcagagatcagactctctctacagagacctctacagcacacacatccagac
atggcacctacaatcactgcagaaatgaccaactctcaggagcatctgactctgactcac
aagctcagaaagcctctggtggagaagttacgcagagagcgaatcaacagcagcattgag
cagctcaagtctctcctgggtccagagttcctcaaacagcagccagattccaagctggag
aaagcagacatcctggagatgacagtttgcttcctgacacagctgcagcagcagcagcat
caagctgtggactcagcagctgtcaatcagggctactccagatgtgtccaagaggtggca
cacttcctgtccaaagaggaggtgaagacacaatcccagagaagactgctgaaccacttc
aacaggctgcagtcctcctctgataagaacctgagagaggctgacttctctcctctgagc
tcctcagtccagaccagcatcaccaaagacaagagtccagtcaacagcaccctctggagg
ccatggtag
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integrated database retrieval system