Lates calcarifer (barramundi perch): 108885545
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Entry
108885545 CDS
T04895
Name
(RefSeq) catenin delta-1 isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108885545
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Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_2
HEAT_EZ
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
108885545
NCBI-ProteinID:
XP_018535449
UniProt:
A0A4W6ER41
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Position
LG8:complement(12729418..12748766)
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AA seq
922 aa
AA seq
DB search
MEQCESAAALLESVREQEVQFEQLTRALEEERRRVGLPATSPSALGRPLPHMQNGRLGDA
DIERLKLTDSYINGTQYRMVDPAHGALDESYTPEDDSQEVHSVFSDEGTTRRAETTLPQM
KKPVSRTVLPSDSMSIDGGLSVSGMGGYSATLDRPYRQAGAGDYPTATVPRNYHYGPVGG
YDDYRGGPPSEAYTSLSRGSHMDDRYRPVDGYRTLDSGYRAPSRQQLDPYVAQPQVSRGM
RALGSAMEMRYGHGHYGLEDDQRSVGYDDYGMGPPPMHPGGYGTMPRLGLGPGGMDRRRL
RSCEDTLDGDMGGVDPYAWGVPMTMERGSMASLDSTLRKAPPTSWRQPELPEVIAMLNYR
LDPVKTNAAAFLQHLTFKNDKVKSEVRRLKGIPSLVSMLDHPSKEVHHSACGALKNISYG
RDHDNKIAIKNCDGVPALVRLLRKTHDQDLTDTITGTLWNLSSHDSVKMEIVDHALHALA
DEVIVPHSGWERGSNGGEESCKPRHLEWETALTNTAGCLRNVSSERSEARRKLRECTGLV
DSLMYIVQSQINRKDVDNKLVENCVCLLRNLSYHVHREVPGCERFAETTPLNQGPAPANK
GGCFGSRKGKDEWFSKGKKDGDDGSADQVDIPKRTTPAKGYELLFQPEVVRVYTSLLRES
KNPSVLEAAAGAIQNLCAGRWTYGRYIRATVRLEKGLPMMAELLAHGNDRVVRAMSGALR
NLAIDNRNCELLGLHAVPHLVANLPGGQSQSGRTLSEETVVSVLSTLTEVLGNSLEAAKT
LRASQGIERLVLINKDGKRSDREVRGAGQVLQLVWAHKELRRPLEKDGWKKSDFMVNLNP
NTSTTNGPSTRSNGTYEDSTTPLLDRGEKRDMIPLNDLGPEAYSTLDQRERRHTLDETTD
TLPRGVYGGRKGSLPLLDSYDG
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtgtgagagcgcagcggctctgctggagtcggtcagggagcaggaggtgcag
tttgaacagctgacccgggcgctggaggaggagaggaggagagtgggcctccctgccacc
agcccctctgccctgggtcgccccctccctcacatgcagaacgggcgtttgggggatgca
gacatagaacgactgaaactgactgactcatacataaacggcacacagtacaggatggtg
gaccctgcacacggagctctagatgagagctacacaccagaggatgactcccaggaagta
cactcagtcttctctgacgagggaaccacgcgccgtgcagagacgactctccctcagatg
aagaaaccagtgtcacgcacggtcctgccctctgactcaatgtccattgacgggggcttg
tctgtgtcaggcatgggcggctacagcgccaccctggaccgtccttacaggcaggctggg
gcaggagactaccccactgccacagtacccagaaactaccactacggcccggtagggggt
tatgatgactaccggggtggcccgccgtcagaagcatacactagtctgagcaggggctca
cacatggatgatcgttacaggcctgttgatggttacaggactctggattctggctaccgg
gccccaagccgtcagcagcttgacccctacgtagcacagccccaggtgagtcggggaatg
agggccctgggctcagcgatggagatgcgttatggccatggccactacggtctggaggat
gaccagcgcagtgtgggatatgacgactatggcatggggcctccacccatgcaccctgga
ggctacggtaccatgccacgtctgggtctcggccctgggggtatggacagaagaagactc
aggagctgtgaagacactttggatggtgacatgggaggagttgacccgtatgcctgggga
gttcccatgacaatggagagggggagcatggcgtcactggacagcacactgaggaaggct
cctccaacctcatggagacagcctgagctgccggaggtcatcgccatgttgaactaccgc
ctggatccagttaagaccaatgctgctgccttcctccagcatctcacattcaaaaatgac
aaggttaaatcagaagttcgtcgcctgaagggtatcccatccttggtgtcaatgctggac
catcccagcaaggaggtgcaccattcagcctgcggagcactaaagaacatttcatatggg
cgagaccatgacaacaagattgccatcaagaactgtgacggagtgcccgctctggtcagg
ttactgaggaaaacccacgaccaggacctcactgacactatcacaggcaccttgtggaac
ctctcctcccacgactcggtaaagatggagattgtggaccacgccctgcacgccctagcc
gacgaggtgatagttccccactcgggctgggagcgggggagcaacggcggagaggagagc
tgcaaaccacgccatctggagtgggagaccgccttgaccaacactgctggctgccttagg
aatgtgagttcagaacgcagcgaggccaggcgaaagctgagagaatgcacaggattggtg
gattcgctcatgtacattgtccaatcacagatcaaccgcaaagatgtggacaataagttg
gtggagaactgtgtctgcctcctgaggaatctgtcctatcatgttcaccgtgaagtcccc
ggctgtgaacgcttcgctgagaccacgcccctcaaccagggaccggcccccgccaacaaa
ggcggctgctttggctctcgaaagggcaaagatgagtggttttccaaaggaaagaaggac
ggtgatgatggaagtgcagatcaggtggatattccaaagaggacaacacctgccaaaggt
tacgagctgttgttccaaccagaggtggttcgtgtttacacatcactgctcagagagagc
aagaacccctcggtgctggaggctgctgctggtgccatccagaacctgtgtgctggcaga
tggacttatggtcgatacatccgggccactgtgcgtctggagaagggtcttcccatgatg
gcagaactactggctcatggcaatgaccgtgtggtcagagcaatgtctggagctttgaga
aacctcgccattgataaccgcaactgcgaactgctcggtttgcatgcagtgcctcacctt
gtggccaacctgcctggaggccagagtcagtctgggcgcactttatcagaggagacggtg
gtatctgtactgagcacactcaccgaggtgctaggcaacagtctggaggcagcaaagacc
ctccgagcctcgcagggtattgagaggctggtccttattaacaaggacggcaaacgttca
gatcgtgaggtgcggggtgcgggccaggtgctgcagctggtctgggcccataaggagctc
cgtcggcctcttgagaaagacggctggaagaagtcagactttatggtcaacctcaaccct
aacaccagcaccaccaatggcccgagcacccgatctaacggcacctatgaagacagcacc
acaccactgctggacagaggggaaaagagagacatgattccactaaatgaccttgggcct
gaggcctactctacactggaccagagggagaggagacacactctggatgagaccacagac
actttaccgcgaggggtgtatgggggcagaaagggctccctgcctctgttggactcctac
gatggttag
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