Lates calcarifer (barramundi perch): 108885560
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Entry
108885560 CDS
T04895
Symbol
bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108885560 (bhlhe40)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
108885560 (bhlhe40)
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
YabA
Motif
Other DBs
NCBI-GeneID:
108885560
NCBI-ProteinID:
XP_018535469
UniProt:
A0AAJ7PPW7
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Position
LG12:14051705..14055347
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AA seq
411 aa
AA seq
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MERITSAQPPPCVPKHPSLDIADMPGMDFPIYVYKPRRGMKRGDESKETYKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALSALLEQQQQKIMALQK
DLQISDHGGDSAESSEEMFRSGFHLCAKEVLHYLASQESSRDLSPSHVISHIQKVAAEVL
QHRSSLHPEESIPRASEKLKKPAGQPPRASEGPAKNCVPVIQRTYPHGTGEQSGSDTDTD
SGYGGEHDKRDPKAPWSESHAREGGLKHAAPEPVAGAIKQEGDEPQAKKSRSDSSEDEIL
SSHVAGGPGSYMSFSPNQPPFCLPFYLIPPAAAAAAAYLPMLEKCWYPGGMPVMYPGMSS
STVGLPPETLPSSLVMSPRAGSPVPHHIAMDSPALHKALKQVPPLNLETKD
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattaccagtgcgcaaccacctccctgtgtaccaaaacacccatcactggat
atagctgacatgccaggaatggattttcccatttatgtgtacaaacccagaaggggcatg
aagcgtggggatgaaagcaaggagacatacaagttgccacaccgactgattgaaaagaaa
agacgcgaccgaatcaacgaatgcattgcccagctgaaggatttgttgccagaacatctc
aagcttacaacgctgggtcatttggagaaagctgtggtgctggaactcactctcaagcat
gtgaaagcccttagcgctctcctggagcaacagcagcagaaaattatggcactacagaag
gacctgcaaattagcgatcatggaggtgacagtgccgagagcagcgaggagatgttccgc
tctggctttcacttgtgtgcaaaagaggtcctccactatctggccagccaagaaagcagc
agggacctgagcccttcccacgtcataagccacatccaaaaagtagcagctgaggtcctg
cagcatcggagcagcctacacccagaagagtccatccctcgagcttcagagaaactcaag
aaacccgctggacagcccccaagggcctctgagggccccgctaagaactgtgttcctgtt
attcaaaggacttacccccacgggacgggagagcaaagcggcagtgacacggacactgac
agcgggtacgggggagaacacgacaaacgcgatcccaaagccccgtggtcagaaagccac
gcgagggagggggggctcaagcatgcagcgcctgagcccgtggccggcgcaatcaagcag
gagggtgacgagcctcaggccaaaaagtcgaggtctgactcctcagaggacgagattctc
tccagtcatgtggcaggaggccctggcagctatatgagcttctcacccaaccagccccca
ttttgcctccccttctacctcataccccccgcggctgcagcagcagcagcgtatctgccc
atgctggagaaatgctggtaccccgggggcatgccagttatgtacccaggcatgagcagc
tccacagtgggcttgcccccagagacacttccctcatccctggtgatgtccccaagggca
gggtctccagtcccccaccatatcgctatggactcccctgctcttcacaaagctttaaag
caggtcccccctttgaacttggaaaccaaagactaa
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