Lates calcarifer (barramundi perch): 108885579
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Entry
108885579 CDS
T04895
Name
(RefSeq) red-sensitive opsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108885579
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Vision
Opsin
108885579
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
108885579
NCBI-ProteinID:
XP_018535497
UniProt:
A0A4W6EV08
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Position
LG12:complement(14410066..14413129)
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AA seq
357 aa
AA seq
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MAEEWGKQAFAARRYHEDTTRGSAFVYTNTNHTRDPFEGPNYHIAPRWVYNVATLWMFFV
VVASVFTNGLVLVATAKFKKLRHPLNWILVNLAVADLGETVFASTISVCNQFFGYFILGH
PMCVFEGYTVSVCGITGLWSLTIISWERWIVVCKPFGNIKFDAKWASAGIIFAWVWSAVW
CSPPIFGWSRYWPHGLKTSCGPDVFSGSEDPGVQSYMIVLMVTCCLIPLAIIILCYLAVW
WAIHSVAMQQKESESTQKAEKDVSRMVVVMILAYCFCWGPYTFFACFAAANPGYAFHPLA
AAMPAYFAKSATIYNPVIYVFMNRQFRTCIMQLFGKQVDDGSEVSTSKTEVSSVSPE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagagtggggaaaacaggcttttgctgcgaggcggtaccatgaagacacaaca
aggggatctgccttcgtttacacaaacaccaaccatacccgagatccctttgagggtccc
aattaccacattgctccacgatgggtttacaatgttgcaactctctggatgttttttgtg
gtcgtggcatcagtcttcaccaatggcctcgtcctggtcgccacagcaaagttcaagaaa
cttcgtcacccactgaactggatcttggtcaatcttgcagttgctgatcttggagagaca
gtttttgccagcaccatcagtgtatgcaaccagttttttggttacttcattttaggacac
ccaatgtgcgtctttgagggctacactgtctctgtctgtggcattacgggtctgtggtcc
ttgactattatctcctgggagagatggatagttgtgtgcaaaccttttggaaacatcaag
tttgatgccaaatgggcttcagctggaattattttcgcctgggtctggtcggcagtgtgg
tgttctccccccatctttggctggagcaggtactggccccatggactgaagacttcctgt
ggacctgatgtattcagtggaagtgaagaccctggagtccagtcctacatgattgttctt
atggttacttgttgtctcatccccttggctattatcatcttgtgctaccttgccgtctgg
tgggctatccattctgttgccatgcagcagaaggaatcagagtcgacccagaaagctgag
aaagacgtatccagaatggtggttgtcatgatcctggcatattgtttctgctggggaccg
tacaccttttttgcctgcttcgccgcggccaatcctggatatgccttccatcctctggct
gctgccatgcctgcatactttgccaagagcgccaccatctacaacccagtcatctatgtc
ttcatgaaccgacagttccgcacatgcatcatgcagctctttggcaaacaagtggatgat
ggctctgaagtatccacatcaaagacagaagtctcctccgtgtctccagaataa
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