Lates calcarifer (barramundi perch): 108885587
Help
Entry
108885587 CDS
T04895
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein rab7 isoform X1
KO
K07897
Ras-related protein Rab-7A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
lcf04140
Autophagy - animal
lcf04144
Endocytosis
lcf04145
Phagosome
lcf04148
Efferocytosis
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108885587 (si:dkey-13a21.4)
04145 Phagosome
108885587 (si:dkey-13a21.4)
04140 Autophagy - animal
108885587 (si:dkey-13a21.4)
04137 Mitophagy - animal
108885587 (si:dkey-13a21.4)
04148 Efferocytosis
108885587 (si:dkey-13a21.4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108885587 (si:dkey-13a21.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108885587 (si:dkey-13a21.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108885587 (si:dkey-13a21.4)
04031 GTP-binding proteins [BR:
lcf04031
]
108885587 (si:dkey-13a21.4)
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
108885587 (si:dkey-13a21.4)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108885587 (si:dkey-13a21.4)
Exosomal proteins of other body fluids (saliva and urine)
108885587 (si:dkey-13a21.4)
Exosomal proteins of colorectal cancer cells
108885587 (si:dkey-13a21.4)
Exosomal proteins of bladder cancer cells
108885587 (si:dkey-13a21.4)
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
108885587 (si:dkey-13a21.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
Septin
GTP_EFTU
IIGP
AAA_24
cobW
AAA_22
AIG1
AAA_16
AAA_5
AAA_7
AAA_33
PduV-EutP
FeoB_N
AAA_29
Motif
Other DBs
NCBI-GeneID:
108885587
NCBI-ProteinID:
XP_018535505
UniProt:
A0A4W6ESR4
LinkDB
All DBs
Position
LG12:complement(14455433..14460862)
Genome browser
AA seq
204 aa
AA seq
DB search
MSEGKGPVTLKIILIGNSGVGKSSFMNRYVNHRFTNMYRATIGTDFLCKTVNMDGDTVNL
QIWDTAGTERFQSLGTPLYRGAHCCMLVFDVTSKDSFSALEVWRKEFLVQGEPQDPSDFP
FIVLGNKTDLSNREVSGKKALQWCEEIGAEYFEGSAKEDLDVEKPFVRAAQRGLQQYKKH
TLENTGHFQITCKQPTETRNTCEC
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaggaaaaggtccagttaccctgaaaataatcctcataggaaactctggggtg
ggaaaatcctccttcatgaacagatacgtgaaccaccgctttaccaacatgtaccgagcc
acgatagggaccgacttcctctgcaagacagtcaacatggacggggacacagtcaacctg
cagatctgggacacagcaggtacagagaggttccagtctctgggaacacctctgtacaga
ggagcccactgctgcatgctggtgttcgatgtcacatccaaggacagtttctctgccctg
gaggtttggaggaaggagtttctggtccagggagagccccaggacccgtctgacttccca
tttattgttcttggcaacaagactgacctgagcaacagggaggtgtctgggaagaaggcc
ctgcagtggtgcgaagaaataggagcagagtactttgaaggcagcgccaaagaagaccta
gacgtagaaaagccgtttgtgagagcggctcagcgcggcttacaacagtacaaaaaacac
acattggaaaatacaggacatttccagataacctgcaaacagccgacagaaactcgcaac
acctgtgagtgctga
DBGET
integrated database retrieval system
