Lates calcarifer (barramundi perch): 108885601
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Entry
108885601 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: PHD finger protein 20
KO
K18402
PHD finger protein 20
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108885601
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
108885601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_5
Tudor_3
Tudor_2
MBT
Agenet
DUF4537
SH3_Hsr9
Zf_WRKY19
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
108885601
NCBI-ProteinID:
XP_018535521
UniProt:
A0AAJ7PQ03
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All DBs
Position
LG12:complement(14640831..14653757)
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AA seq
997 aa
AA seq
DB search
MSKTPPNRRGITFEVGAQLEARDSLKNWYAANIEKIDYEDEKVLIHYRQWSHRYDEWFDW
TSPYLRPVERIQLRRQGLQDDAPVPGFHVNDKVLASWSDCRFYPAKVISVNKDASYTVKF
YDGVIQTVKGIHVKPFIKERGGGKPRSSDRNMVRRVPNRRDRRPQENGGPKNKRARRSTS
DQEEDSNSEDEEREEEMVNEKNKKTNGEIDAPPTIKKEEEISEQGDQNKSRDAEKGTALT
NGVKMEEDDKQNNDRCHVNGEVKEEQMETEQIETKPYTESPKPYTELPTEPSAQTEQVSV
TMTTTESNGDVEQKPNVQSESSQPAVDVTPPQPVKPVRKQGFHNPNRFSREPLYRVIKNQ
PPPVLSINLDHNPFKCSAPGCTKSFRKAKLLHYHMKYYHGEEQPPEEERSPTRSVQTRAS
EKQATATGLDGPKRRRTISASMHSVGGAAAPRGDVKTAGRRISAPPAVNTQGHQQRALLR
EKSKENQLDRNGCQQQDKDPDKSVFDIGSVKDKLKEKPKQKDFLRIKLKKKKKKKKAKSD
YTGSEENIDISVLGLQSKLNLPLKPPPSHNHKPEAYPSRPGYSYSEQIHVDDEDSVSDWS
TDSCGWSDDDYGVDLDVTTPPLSVDSGAVDTSDQEIVRCICEVEEENDFMIQHGTCMGLL
EENVPDRYTCYICRDPPGQRQSLRYWYDREWLSNGHMYGLSFLEENYSHQNAKKITTTHQ
LLGDVHHVVEILNGLQLKMNVLQSSSHPDLQLWRQPWKHLERSRTCSDSCRSSDAAPSPV
TPDEDMSRGEILMSNALEKLSRAATAATSSSSCSSSPFPSFQDSYITSEHCYQKPRAYYP
AVEQRLVVETRQGSELEDSMRSTEELLEREQRYGSLLETDKPKSTGTNNKASLGGLWCQA
EMRDEGGRDPGEAADKCGQHQQWQINLLDHIDAVQDEVSHRMDFIERELDVLESWLDYTG
ELEPPEPLARLPQLKHRMKRLLTQLGKVQQIALFSST
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagacgccccctaacagaagagggataacatttgaggtgggagctcagcttgag
gccagagacagcctcaaaaactggtatgctgccaatatagagaagattgactacgaggat
gaaaaagtactaatccattaccgtcagtggagccaccgttacgacgagtggtttgattgg
acaagtccctacctgagacccgtggagaggatccagctgaggcggcagggcctgcaggac
gacgctcctgtgcctggctttcatgtgaatgacaaggtcctggccagctggtctgactgc
cgtttttaccccgctaaggtcatttctgtcaataaagatgcatcctacactgtgaaattc
tacgatggcgtcatccagacagtgaaggggatacacgtgaagccgtttattaaagagaga
ggtggagggaagcctcggtcttctgacaggaacatggttaggagggtcccgaatcgcaga
gacaggaggcctcaagagaatggaggtcccaaaaataagcgcgccaggcgaagcacttct
gaccaggaagaggacagcaacagtgaggatgaggagagggaagaggagatggtaaatgag
aagaacaagaaaacaaatggtgagatagatgctccacccactatcaaaaaggaagaggaa
atatcagagcaaggagaccagaacaagtccagagatgcagaaaaggggacagcactcaca
aatggagtaaagatggaggaagatgacaaacagaacaatgacaggtgtcacgtaaatgga
gaggtgaaagaagaacagatggaaacagaacagattgaaacaaagccatatacagagtct
cccaagccatacacagagttacccactgagccgtcagcacagacagagcaggtgtcggtc
actatgacaaccacagaatccaatggagacgtggagcagaagccaaacgtccaatcagaa
agctctcagcctgcagtcgatgttacacctccccaacctgtgaaaccggtaaggaagcaa
ggtttccacaaccccaacaggttcagcagagaaccattgtaccgagttatcaaaaaccaa
cctcctcccgtcctgtccatcaacctcgaccacaacccattcaagtgcagtgctcccggc
tgcactaagtcattccgtaaggctaagctgctgcactaccatatgaaatattaccatggt
gaagagcagcctccagaggaggagcggagccccaccaggagcgtccagaccagggccagt
gagaaacaggctactgccacgggcttggacggcccaaagagaaggcgcaccatctctgcc
tctatgcactctgttggaggtgctgcggctccccgcggtgatgtgaagacagcaggcagg
cgcatatcagccccgcctgcagtcaacacacagggccatcagcagagggcactactgagg
gagaagagcaaggagaaccagctggacaggaatggatgccagcagcaggacaaggaccca
gacaagagtgtctttgacattgggtcagtaaaagacaaactcaaagagaaaccgaaacag
aaggacttcctccgcattaaactaaagaagaagaagaagaaaaagaaggccaagtctgac
tacacaggtagtgaggagaatattgacatctcagtattgggtcttcagtccaaattgaat
ttgccactcaaaccccccccctcacacaatcacaagcctgaggcctaccccagcaggccc
ggatacagctactcagaacagatacatgtggatgatgaagatagcgtcagtgactggtcc
actgacagctgtgggtggagtgacgatgactatggggttgatttggatgtcaccacacct
cccttgagtgtggactctggcgctgtggacaccagtgaccaggagatagtgcgatgtatc
tgtgaggtggaagaagagaatgactttatgatccagcatggcacctgcatggggttgctg
gaagaaaatgttccggacagatacacctgctacatctgcagagacccaccaggtcagagg
cagagtctgcgctactggtatgatcgtgagtggttgagcaatggtcacatgtatggtctc
tccttcttggaagagaactactcccaccaaaatgccaagaagatcaccaccacccaccag
ctgctgggagacgtgcaccatgtggtagagatccttaacggactgcagctcaagatgaac
gtcttacagagcagcagtcaccccgacctgcagctgtggaggcagccatggaagcatttg
gagaggtcacggacttgctctgactcatgtcggagcagtgacgcagccccatctcctgtg
actcccgatgaggacatgagccgaggagagattttaatgtccaacgctttggagaaactg
agtcgggctgctacagctgccacctcatcttcctcctgctcctcttcccccttcccatcc
ttccaagactcatacattaccagtgaacactgctaccagaaaccacgggcgtattaccca
gcggtggagcagagactggtggtggagacccgacagggttccgagctggaggacagtatg
agaagcactgaggagctcctggagcgggagcagcgctacggaagcctgttggagacagac
aagcccaaatcaactggcacaaataacaaggcttccttgggtggcttgtggtgccaggct
gagatgagggacgaaggtgggagagatcccggagaggctgcagataagtgcggacagcat
caacagtggcagatcaacctgctggatcacatagatgcagtccaggatgaggtatcacac
aggatggatttcattgagagggagctggacgtgctggagagctggttggactataccgga
gagctggagcctccagaacctctggcccgtctgcctcagctcaaacaccgcatgaaacgg
ctgctgacacagctgggcaaggtgcagcagatcgccctgttcagctccacatga
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