Lates calcarifer (barramundi perch): 108885678
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Entry
108885678 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: bone morphogenetic protein 7-like
KO
K16621
bone morphogenetic protein 7
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108885678
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108885678
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108885678
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108885678
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Transforming growth factors (RSTK binding)
108885678
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Morphogens
108885678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
108885678
NCBI-ProteinID:
XP_018535636
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Position
LG12:complement(15171969..15181806)
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AA seq
425 aa
AA seq
DB search
MVTSASTTVMTLLSCCYCVLASQVSFSNFSLDNEVRSSFIQRRLRSQERREMQREILSIL
GLPHRPRPHVYTKHNAAPMFMLDLYNTISTDAEPHGYSYYKPVLPTQASPMVTPQDSRFL
DDADTVMSFVNLVVQDQDLLYQQHRREFRFDLSRIPEGEAVTAAEFRIYKDFIQGRYENE
TFRVSIYQVLQEPPNSEVELLLLDQRDVWAAEDGWLIFDLTTTSNLWLVNPEQNLGLHLV
LEDSHGQRRNPQLAGLVTGNGPQDKQPFMVAFFKASEVRFRSIRSAHGHKGRQSNRSKPQ
RTVQDALKAVEAATDNLGISKEGCKKHELYVSFRDLGWQDWIIAPEGYAAYYCEGECAFP
LNSYMNATNHAIVQTLVHFINPETVPKPCCAPTQLHGISVLYFDDSSNVILKKYRNMVVR
ACGCH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggtgacaagcgcctcgacgacagttatgacccttctgtcttgttgttactgcgtgttg
gcctcgcaggtctccttctccaacttctctctggacaacgaggtgcgctccagctttatc
cagcggcggctgcggagtcaggagcgcagggagatgcagcgggagatcctctccatcctg
gggctgccgcaccgtccgcggccgcacgtctacaccaagcacaacgccgccccgatgttc
atgctggatctgtacaacaccatttctacagacgcagagccgcacggatactcttactac
aagcctgttttaccgacccaggcctcccccatggtgaccccacaggacagtcgcttccta
gatgacgcagatacggtgatgagctttgtcaacctcgtcgttcaggatcaggatcttctc
taccagcagcaccgaagggaattccgctttgacctttcccgtattccagagggagaggcc
gtcacagcagcagagttcaggatttacaaggatttcatccaaggacgctatgagaacgag
acattcagagtcagcatctaccaggtcctgcaggagcctccaaatagtgaagtggagttg
ttgctgctggaccagcgagatgtttgggctgcagaggatggctggctgatttttgacctg
accaccaccagtaacctctggctggtcaaccctgagcagaacctaggcctgcacctggtc
ttggaagatagccatggccagaggaggaacccccagctggcggggctggtgaccggcaat
ggaccccaggacaagcagcccttcatggttgccttcttcaaagccagtgaggtgcgtttc
cgcagcatccgctctgcccatggccacaaaggtcgccagtctaaccgctccaaacctcag
aggactgttcaggatgcgctaaaggcagtggaggcagcaacagataaccttggcatatct
aaagagggatgtaaaaaacatgagctgtacgtcagtttcagagatttggggtggcaggac
tggatcatagcaccagagggctatgcagcatactactgcgaaggggaatgtgcttttcct
ctcaactcctacatgaatgccactaatcacgctattgtgcaaactctggtgcactttatc
aacccagagacggtacccaagccctgctgtgcccccacccagctccatggcatctcagtg
ctctactttgatgacagctccaacgtcatcctcaaaaagtaccgcaacatggtggtcaga
gcctgcggctgtcactga
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