Lates calcarifer (barramundi perch): 108885711
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Entry
108885711 CDS
T04895
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108885711
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108885711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
DFF-C
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
108885711
NCBI-ProteinID:
XP_050922971
UniProt:
A0AAJ8AZ40
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MKRTYQRPHSPKPEPEPSFVSLKSDRSLGRLIDFKEQQHSATKKTHQRPDSPEGECSCVS
LKSDRSLGRLIDFKEQHSPTKKVDQESSEVPSGQSAQQHQTHLDSIFMLLEENIVTFVKK
ELKKMQKVLSLDYPECLESQREDEEVLDGEDEEQRRSSREEFLKITLNFLRRMKQEELAD
CLQSRHFAAVCRRKLKSNLKKKFQCLFEGISKAGNPTFLNQIYTELYITEGGTGEVSDEH
EVRQIETASRKPDRPETTIRQEDLFKASPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWA
EDKANQDIHFTFPFTFRELNVLKEKKLSLVELVHHFFTETKEAGICRFEEFQVVFIFDGL
DECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSAHLWITTQPAAANQIPPECVD
MVTEVRGFTDPQKEEYFRKRFRDEDQASRIISHIKTSRSLHIMCHIPVFCWITATVLEDV
LKTREGGELPKTLTQMYIYFLVVQTKLKNIKYDGGSGSDPHWSPETRKMIESLGKLAFTQ
LQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAAL
HVHLTFIKSGVNLLSEEQPTSQKSKLFRDKSTLFYQSAVDKALQSPNGHLDLFLRFLLGL
SLPTNQILLRGLLTQTGSGSETNQETVQYIKKKVEETPSAEKSINLFHCLNELNDRSLVE
EIQQSLSSGRLSTDKLSPAQWSALVFILLSSEKDLDVFDLKKYSASEEALLRLLPVVKAS
NKALLSGCNLSERSCEALSSVLSSQSSSLRDLDLSNNNLKDSGLKTLSVGLKSPHCSLET
LSLSGCLITEEGCASLVSALRSNPSHLRELDLSYNHPGDSGVKLLSAGLEDPDWRLDTLR
VEPGGVRWLRPGLTKYSCQLTIDTNTVNTKIKLSDDNRKVTLVDEDQSYPDHPDRFDQCP
QLLCRTGLTGRCYWEVEWRGRVYISVSYRGIRRKGDSDCVFGRNDQSWTLYCSGGGYYFW
HSSRGTSMSSSSSSSSSSSSSSSSSSTSSSSSVSNRVAVYVDCPAGSLSFYRVSSDSLIH
LHTFNTTFTEPLYPGFGFLSLFSPVSSVSLCSV
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggacatatcagagaccacactcccctaaacctgaacctgaacccagttttgtg
tctttaaagagcgacaggtctctgggtcgcctcattgattttaaagagcaacaacactct
gctacaaagaagacccatcagagaccagactcccctgaaggggaatgcagttgtgtgtct
ttaaagagcgacaggtctctgggtcgcctcattgattttaaagagcaacactctcctaca
aagaaagtggaccaggagagctcagaggttcccagtggtcagtctgcccagcagcatcaa
acacacctggactccatatttatgctgctggaggagaacatcgtcacttttgtgaagaag
gagctgaagaagatgcagaaggttctgagtctagattacccagaatgcttagagagtcag
agggaggatgaggaggtgttggatggtgaggatgaggagcagaggaggagcagcagagag
gagtttctgaagatcacactgaacttcctgaggagaatgaagcaggaggagctggctgac
tgtctgcagagcagacattttgctgcagtttgtcgacgtaaacttaaatctaacctgaag
aagaagttccagtgtttgtttgaggggatctctaaagcaggaaacccaacctttctgaat
cagatctacacagagctctacatcacagagggagggactggagaggtcagtgatgaacat
gaggtcagacagattgaaacagcatccaggaaaccagacagaccagaaacaaccatcaga
caagaagacctctttaaagcctcacctggaagagatgaaccaatcagaacagtgatgaca
aagggagtggctggcattgggaaaacagtcttaacacagaagttcactctggactgggct
gaagacaaagccaaccaggacatacacttcacatttccattcactttcagagagctgaat
gtgctgaaagagaaaaagttgagcttggtggaacttgttcatcacttctttactgaaacc
aaagaagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtctg
gatgagtgtcgacttcctctggacttccacaacactgagatcctgactgatgttacagag
tccacctcagtggacgtgctgctgacaaacctcatcagggggaaactgcttccctctgct
cacctctggataaccacacaacctgcagcagccaatcagatccctcctgagtgtgttgac
atggtgacagaggtcagagggttcactgacccacagaaggaggagtacttcaggaagagg
ttcagagatgaggatcaggccagcaggatcatctcccacatcaagacctcacgaagcctc
cacatcatgtgccacatcccagtcttctgctggatcactgctacagttctggaggatgtg
ttgaaaaccagagagggaggagagctgcccaagaccctgactcagatgtacatctacttc
ctggtagttcagaccaaactgaagaacatcaagtatgatggaggatctgggtcagatcca
cactggagtccagagaccaggaagatgattgagtctctgggaaaactggcttttactcag
ctgcagaaaggaaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatc
agagcagcctcagtgtactcaggagtgttcacacagatctttaaagaggagagaggactg
taccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggctgctctt
catgtccatctgaccttcatcaagtctggagtcaatctgctgtcagaagaacaaccaacc
tcccagaagtctaaactgttcagagacaaatcaacacttttttaccagagtgctgtggac
aaggccttacagagtccaaatggacacctggacctgttcctccgcttcctcctgggtctt
tcactgccgaccaatcagattctcctacgaggtctgctgactcagacaggaagtggctca
gagaccaatcaggaaacagtccagtacatcaagaagaaggttgaagagactccctctgca
gagaaaagcatcaacctgttccactgtctgaatgaactgaatgatcgttctctggtagag
gagatccaacagtccctgagttcaggacgtctctccacagataaactgtctcctgctcaa
tggtcagctctggtcttcatcttactgtcatcagaaaaagatctggacgtgtttgacctg
aagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctct
aacaaagctctactgagtggctgtaacctctcagagagaagctgtgaagctctgtcctca
gttctcagctcccagtcctctagtctgagagatctggacctgagtaacaacaacctgaag
gattcaggactgaagactctgtctgttggactgaagagtccacactgttcactggagact
ctcagtctgtcaggctgtctgatcacagaggaaggctgtgcttctctggtctcagctctg
agatccaacccctcccatctgagagagctggacctgagctacaatcatccaggagactca
ggagtgaagctgctgtctgctgggctggaggatccagactggagactggacactctcagg
gtggagcctggtggagtccgatggttgagaccaggtctgacgaagtattcctgtcaactc
acaatcgacacaaacacagtgaacacaaagatcaaactgtctgacgacaacaggaaggtg
acacttgtggatgaggatcagtcatatcctgatcatccagacagatttgatcagtgtcct
cagctgctgtgtagaactggtctgactggtcgctgttactgggaggtcgagtggagagga
agggtttatatatcagtgagttacagaggaatcagaaggaaaggagacagtgactgtgtg
tttgggaggaacgatcagtcctggaccctgtactgctctggtggtggttactacttctgg
cacagtagcagaggaacatccatgtcctcctcctcctcctcctcctcctcctcctcctcc
tcctcctcttcctcctccacctcctcctcctcctctgtctctaacagagtagcagtgtat
gtggactgtcctgctggctctctgtccttctacagagtctcctctgactctctgatccac
ctccacaccttcaacaccacattcactgaacctctgtatcctgggtttgggttcttgtcc
ttgttctctcctgtttcctcagtgtctctgtgttcagtgtag
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integrated database retrieval system
