Lates calcarifer (barramundi perch): 108885769
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Entry
108885769 CDS
T04895
Symbol
fhip2a
Name
(RefSeq) protein FAM160B1
KO
K26421
FHF complex subunit HOOK interacting protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108885769 (fhip2a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108885769 (fhip2a)
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
108885769 (fhip2a)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
108885769 (fhip2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Tti2
Motif
Other DBs
NCBI-GeneID:
108885769
NCBI-ProteinID:
XP_050932769
UniProt:
A0A4W6C466
LinkDB
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Position
LG16_LG22:2835315..2846233
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AA seq
743 aa
AA seq
DB search
MFSKFTSILQHAVEALAPSLPLQEDFVYHWKAITHYYIETSDDKAPVTDTNIPSHLEQML
DILTQEEGERESGETGPCMEYLLHHKILETLYTLGKADCPPGMKQQVLTFYTKLLAHIRQ
PLLPHINVHRPVQKLVRLCGEVLAAPTENEEIQFLCIVCAKLKQDPYLVNFFLENKSKRP
ETKSSERAEQVKENVLAPDTGQSLAEEQADCPEEPQAAAAASTSSPTNNNNNSSNYNLVT
SLLNLTKSPDGRIVVKACEGLMLLVSLPEPAAAKCLTENTELCELLTDRLVSFYKALPQS
MDPLDIETVESVNWGLDVYNLKEDAAVFTGKRALISFLSWLDYCDQLIKEAHKSAAAVMA
RAVRERFFVSVMEPQLMQTSEVGILTSTALLNRIIRQVTSEALLQEMVYFLLGEEREPET
PATVAQNPLRHRLIEHCDHLSDEISIMTLRLFEQLIQKPNQHILHSLVLRSLEERNYLEN
KPQEEREPLENGQPHDAVDLEEDPLFGDDLSPNSRLSGSDWLSSSPPQSPDHSKCDGKTE
VHKIVNSFLCLVPDEAKSSYHVEGTGYDTYLRDAHRQFRDYCGVCQRWDWRGNPKPFEKC
NLDIPFFEGHFLKVLFDRMGRILDQPYDVNLQVTAVLSKLSLLPHPHLHEYLLDPYISLA
PGCRSLFSVIVRVVGDLMLRIHRIPDFTPKLLLVRKRLLGLEPEGINIDHMTLLEGVIVL
EEFCKELAAIAFVKYHAAASSSP
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaaatttacgtccattctccagcacgctgtggaagcgcttgccccgtcgctg
cccttgcaggaggactttgtctatcactggaaggccattacacattattacattgagact
tctgatgacaaagctccagtcacagacaccaacatcccatcccacctggaacagatgctg
gacatcctgacccaggaggaaggggaaagggagtctggagagactggaccctgcatggag
tatctcctacaccataagatcctggagactctctacaccttgggcaaggcagattgtcct
ccagggatgaagcagcaggtgcttaccttctacacaaagctgctagcgcacatacgtcag
cctctcttgccacacatcaatgtccacagacctgtacagaaactggtccgtctgtgtggg
gaggtgctggctgctcctacagaaaatgaagagattcagttcctatgtatagtctgtgcc
aaactgaagcaggacccgtacctagtcaacttctttcttgagaacaagtcaaagagacct
gagacaaagagttctgaaagagcagagcaggtaaaggagaatgttttggctccagacact
ggtcagtctctggcagaggaacaggctgactgcccagaggagccacaggctgctgctgct
gcctccacatctagtccaaccaacaacaacaataacagcagcaattataatcttgtcacc
tccctgctcaacctcacaaagagcccggatggcagaatagtggtgaaggcgtgtgagggc
ctgatgctgctggtcagtttaccagagcctgctgctgccaagtgtttgactgaaaacact
gagctctgtgagcttctgaccgacaggctggtctccttctataaagccctaccacagtcc
atggaccccttggacattgagacagtggagtcggtcaactggggtctggatgtatataac
ctgaaggaggatgctgcagtcttcacagggaagagggctctcatctcctttctgtcctgg
ctagattactgtgaccagctcatcaaggaggctcacaagtcagcagctgcagtgatggca
agagcagtgagagaaagattctttgtgtctgtgatggaaccacagcttatgcagacgtct
gaggtgggcatccttacctccacagccctgctgaataggatcatcaggcaggtgacatca
gaggctctgctgcaggagatggtttacttcctgctgggggaggagagagagccagagact
ccagctactgtcgctcagaatccactcagacacagactcatcgagcactgtgaccacctg
tcagacgagatcagcatcatgacgctgcgcctatttgagcagctgatccagaagcccaac
cagcacatcctccacagcttggtgctgcgtagcctggaggagaggaactacctggagaac
aaacctcaggaggagcgggagcccctggagaatggccagccccatgatgccgtagacctt
gaggaggatccactgttcggtgacgacctctctccaaacagcaggctgtctggttctgat
tggctcagctcctctccaccacagagtcccgaccactcaaagtgtgatgggaagacagag
gtccacaaaattgtcaacagtttcctgtgtttggtgcctgatgaggccaagtcatcgtat
cacgttgaaggcacgggctatgacacctacctcagagatgcacacagacagttcagggat
tattgtggggtctgtcagcggtgggactggaggggaaatccaaagccttttgagaagtgt
aacttggacatcccgttctttgaaggccacttcctcaaggtcctcttcgacaggatgggc
cgcatcctagatcagccctacgacgttaacctgcaggtgaccgctgtgctgtccaagctg
tctttgttaccacacccccacctgcacgaatacctgctggacccctatatcagcctggcc
cctggctgcaggtctctgttctctgtcatcgtcagggtggtaggagatctcatgttgagg
attcatcgcatcccagacttcacacccaaactgctgctcgtgaggaagagattattaggt
ctggagccagagggcatcaatatcgaccacatgactctgctggagggggtgatcgtgcta
gaggagttctgcaaagagttggcagccatcgccttcgtcaaataccacgcagctgcctcc
tcctcaccgtaa
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