Lates calcarifer (barramundi perch): 108885779
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Entry
108885779 CDS
T04895
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108885779 (npas4l)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108885779 (npas4l)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_9
PAS_2
Per3-like_PAS-A
HLH
Motif
Other DBs
NCBI-GeneID:
108885779
NCBI-ProteinID:
XP_018535747
UniProt:
A0A4W6CES0
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Position
LG16_LG22:complement(3143485..3152363)
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AA seq
775 aa
AA seq
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MTIWCNSCKCHVKAPCTSHHLPEDDRRSLCRRIRSTKGASKARRDHINREIRNMRALLPI
TQEDQERLSYLHSMAAICTYIRKSVFFQGLPAGERSHCSLPYEAFLQALHGFILVTTTQG
RLVYVSENVAEYLGLSMIDVLQGDNFYDMVDRSDVDVVKSNLDIKNSSSSERSFICCMQT
SKAFKLQHGSCCSMLVRGSFQSFPQPCPSSCAASPPTEPLFVALCTPTVNHLRSSDSHLC
HSFNSIHTLDMTFTQLSDSVVYFLGYSADEMIGRSWYSLVHPEDLSLSADSHRSLMQTDE
GFQVEMVLRLQCEDLSWTWIYIQANKDPERQSISCANYIISETEARFLQKKISSDAFRPS
SLANSCNFTAQQAPHSQTYNNTKCFKRQRTSDSQSEEPGARARRESEQDRYYVACASSQG
DCSPVPLGESPALFTPPYSPDSSSSLQQEELSHGLLMDVHGYTDQLLSSPEGSPSYYSYP
EAGLTCHQSPSDSLPAAAEQTFDQGAFGAFTSRSPLSSSSPAYDFQACTSDARLVPDCLS
ASDMCESPVDCALHQDDFSLLEQPEGGSLVQVHHVPHHVLPMHSSLLTPSQSPTSTESNQ
YNEREQAEISILAQQISSLASSFDMYHTLNPLQNMTQPAATNTLPSACDWPHHPPLPSAL
PLKRELVLDDGMFDSILKDLDMAARKGSTSGPAVVSYSYQQGLVCSRSGPHHSEQEPLGL
STATPEDPLPAEQFTAMDPFSLQLGHHDQNTGLHQLNHYMQRSLQQDGLAKENLY
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgactatttggtgcaactcctgcaagtgtcatgtaaaggctccgtgcacctctcatcat
ctgcctgaggatgaccgccgctcactctgcagaaggatcagatcaaccaaaggagcatcc
aaagcccgacgggaccacatcaatcgtgagatcaggaatatgcgggctctgttgcccatc
acccaggaagaccaggagcgtctctcctacctgcactccatggcagccatctgcacctac
atcaggaagtctgttttcttccagggactcccagctggggagagatcacactgttctctg
ccatacgaggcctttcttcaagccctgcatggcttcatcctggtcactaccacccaaggg
aggctggtctacgtgtccgaaaatgtagctgagtatcttggcctgtccatgattgatgtg
cttcaaggagacaatttctatgacatggtggatcgctctgatgttgatgttgttaaatca
aacctggacatcaaaaacagctcatcatcagagaggagttttatatgctgtatgcaaacc
tccaaagccttcaagctgcaacacggcagctgctgctccatgctggtcagagggagcttc
cagtccttccctcagccctgtccgtcctcctgtgcagcctctccccccaccgagcctctg
tttgtggccctctgcacccccacagtgaaccacctgcggagctcagactcccacctctgc
cacagcttcaacagcatccacacactcgatatgaccttcactcagctgtcagacagtgtt
gtatattttttggggtattcagcagatgaaatgattggtcggtcgtggtacagtctggtc
catcctgaagacctttcgttaagtgcagattctcacagaagtttaatgcagacagatgag
ggcttccaggtagagatggtgctgagactgcagtgcgaggatctgtcatggacctggatc
tacattcaagctaacaaggatcctgagcgtcagagcatcagctgtgctaactacatcatc
agtgaaacagaggccagatttctgcagaagaaaatcagcagcgatgccttcaggccgtcg
tctctggcaaattcctgcaattttacagctcaacaggcgcctcactctcagacctacaac
aacactaaatgttttaaaaggcagaggacatctgacagccaaagcgaggagccaggtgcc
agagctaggagggagtcagagcaagacagatactatgtggcgtgcgcctcctcccaaggc
gattgctcacctgttcccttgggtgagagccctgctctcttcacccctccctacagccca
gactcctccagctctctgcagcaggaggagctcagccatggcctcctgatggatgtgcat
ggatacacagatcagctgctgtcctcccctgagggttctccctcctattactcttaccca
gaggcagggctcacctgtcaccagtcgccctccgactccctccctgcagccgctgaacaa
acctttgaccagggggcctttggtgcattcacttcccgctctccactctcctcctcatct
ccagcctatgattttcaagcttgtacatctgatgctcgattagttccagactgcctgtct
gcgtccgacatgtgtgagagcccagtggactgtgctctgcatcaagacgatttcagcctc
ctagagcagccagaagggggcagccttgtccaagtgcatcatgtgccccaccacgtgttg
cctatgcattccagtcttcttacccccagccagtctcccacatccacagagtctaaccag
tacaatgagagggagcaggcagagatcagtattctggcacagcagatctcctctctggcc
agcagcttcgacatgtatcacaccctgaacccgcttcaaaacatgacccaacctgcagct
accaacaccctgccctccgcctgtgactggccccatcaccctcctctcccctcagccctt
cctctaaagcgtgagctggtccttgatgatggcatgttcgacagcatcctgaaagacttg
gacatggctgcaagaaaaggcagcacgtccggccctgctgttgtatcatacagctaccag
cagggtttagtgtgcagcaggagtgggccccatcactcggagcaggagcctctgggtctc
tccacggccactccagaggacccgctgcctgcagagcagttcactgccatggatcccttc
agtttgcagctgggacaccatgaccaaaacactgggttgcatcaactcaaccactacatg
cagagaagccttcagcaagatggacttgctaaagaaaacctgtactga
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