Lates calcarifer (barramundi perch): 108885781
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Entry
108885781 CDS
T04895
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108885781
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108885781
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_7th_ZNF462
zf-C2H2_15
ADK_lid
zf-BED
Zf-C2H2_ZNF451
GPS2_interact
Motif
Other DBs
NCBI-GeneID:
108885781
NCBI-ProteinID:
XP_018535755
UniProt:
A0A4W6E6H9
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Position
LG15:complement(29787697..29794412)
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AA seq
636 aa
AA seq
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MVLISPHAMQATRASTTVSVFADCSIPAGLRIGPVPGIFKLGKYVSDRKEVGPKKKIRLV
RGEFVDESGCPVPDWIGFIRAARNSQEQNLEAVSDLPGGQIFYRVLREIPAGEELSVWYS
NALAQWYDIPTTATPTHDEKGEERYICWYCWRIFKYPNTLKAHVHFHCALSNGRGFVSSE
QVRGTETFSRSPKSGDIPNNSTSPRSGHSNSSISDSGRRAVSSSSFLNKAGLSKKSSSEE
QDRALDMSVTTARNQGQLLGLGATSSVLSSMGFHPGVRSAFKPTGVSKVPGADASREDAN
GKLSGLGFSKLIGNMKPIRNVGETLNGGGSHPPKCAPAIMDATSSMVPCTNAVRGFPLLP
HMEETSAFKHVESRMHSGLSPSRYPQMPPGLHFERFSLPHFDGVKTYGGDCNIPLMPFTV
YNGELLYSSPYYPLKFHFGNLLKYPESMSYFGAPSLSQDLGSITNIDREIAMHTQQLSEI
AAEKNRTRLDSMPAGAPSNAGSGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCK
VCFRPFGDPSNLNKHIRLHAEGNTPYRCDFCGKVLVRRRDLERHVKSRHPGQTVKKLDDK
AGGLFEDAEQKSDNDSDVDVCFTDDQSDQESSKNND
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggttctgatctcaccccacgccatgcaagccacccgggcgtccaccaccgtcagtgtg
tttgcggactgcagcatcccggccgggctccggataggaccggtaccgggcatcttcaaa
ctggggaagtacgtgtcggatcgtaaagaagttggacccaagaagaagatccgcttggtg
cggggagagtttgtggacgagtcgggctgtcccgtaccagactggatcggattcatccgc
gccgccaggaacagtcaagagcaaaacctggaggctgtatcggacttacctggcggacag
attttctaccgtgtgctaagagaaatccctgcaggagaggagctcagtgtttggtattcc
aacgctctggcacagtggtacgacatccccaccacggccactcccacgcacgacgagaaa
ggtgaggagcgttacatctgctggtactgctggagaatattcaaatacccgaacacactc
aaggcccacgtgcacttccactgcgccctgagcaacgggcgggggtttgtgagcagcgag
caggtcagaggcaccgagacgttcagcaggtcaccaaagtctggagacatccctaacaac
tccacctctccgaggagcggtcacagtaactcctccatctcagactctggcaggcgcgcg
gtgtcctcctcgtcgtttctaaacaaagcgggactgtcgaagaagagcagctccgaggag
caggacagggccctcgacatgagcgtcaccacagccagaaaccagggacagctcctcggc
ctgggcgcaacgtcctctgtcctgagcagcatgggcttccacccgggcgtgcgctctgcc
ttcaagccgaccggtgtctccaaagtccccggcgcggacgcctccagagaggacgccaac
gggaagctgagcggtctgggattcagcaaactcattgggaacatgaaaccaatccgcaac
gtgggcgagactctaaacgggggagggagccatcctccaaagtgcgcacctgcaattatg
gacgccacatcttcaatggtgccatgcacaaacgcggtccggggtttcccgttgctgcct
cacatggaggagacctcggcctttaagcacgtagagagtcggatgcactccggcctgtcc
ccgtcccgttacccccaaatgccccctggactccattttgaaaggttctctctccctcac
tttgacggtgttaagacttatggaggagactgtaacatcccactaatgcccttcaccgtc
tataacggggagcttctgtacagctcaccttactatccgctcaaattccacttcggcaac
ctcctcaagtacccagagtccatgtcctactttggtgcgccctcactgagtcaagacctg
ggctccatcaccaacatcgaccgggagatcgccatgcacacgcaacagttgtccgaaatc
gccgcggagaagaaccggacgaggttggactcgatgcccgcgggggcccccagtaacgcc
gggtccggtaaacctaaaaagggacacctgtgtctgtactgtggcaagctgtactccaga
aaatatggcctgaaaatccacatgaggactcacacgggttacaaaccgctcaagtgcaag
gtgtgcttcaggcccttcggagaccccagcaacctgaacaaacacatccggcttcacgcc
gaggggaacaccccgtacaggtgcgacttctgcggtaaggtgctggtgcggaggcgggac
ctggagaggcacgtcaaatccagacacccgggacagaccgtcaagaaactggacgacaaa
gctggcggcctgttcgaggacgcggagcagaagagcgacaacgacagtgatgtagacgtg
tgcttcactgacgaccagagcgaccaagagtccagcaaaaataacgactga
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