Lates calcarifer (barramundi perch): 108885798
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Entry
108885798 CDS
T04895
Name
(RefSeq) UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2
KO
K09654
beta-1,3-N-acetylgalactosaminyltransferase 2 [EC:
2.4.1.313
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00515
Mannose type O-glycan biosynthesis
lcf01100
Metabolic pathways
Module
lcf_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
108885798
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108885798
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.313 protein O-mannose beta-1,3-N-acetylgalactosaminyltransferase
108885798
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
Wide specificity
108885798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
108885798
NCBI-ProteinID:
XP_018535792
UniProt:
A0A4W6CHR1
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All DBs
Position
LG16_LG22:3507486..3517932
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AA seq
495 aa
AA seq
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MRRLALTLLPCAVAVLVHLWLAQRPSSTPLDNNTHSDEALPFYEVLVGVLSARHHYELRQ
AIRETWLGYLRDHPHFQHRVGVKFIVGKHGCPIPEEDREDPYSCSILNFTEPGRGQDAEI
EIVTVSDPSVLAPSDVSAIALDFKVLHPVVITRLGVFPSGTRPELQTNVTVKLLQLDQEE
AVVTARFSAISTGTMVNGVWYKPVEQFILPKGFEGTLVWESLDSSGLTTVNSSSVQLNDG
GGVLKISSIAEGILPHRSALGFPGLAGGFTFTIYDGDGLEELLRGRPARMEHHASRLRQE
DAALQQESLRHGDMVFVDVVDTYRNVPSKLLQFYKWSVGNADFNLLLKTDDDCYIDVDSV
LMKIDHKGLKRSNFWWGNFRQSWAVDRIGKWQELEYASPAYPAFACGSGYVVSRDLVQWL
ASNAEKLKAYQGEDVSMGIWMAAVGPQKYQDPGWLCEKECYLDMLSSPQHTAEELHILWD
RKRACGDPCGCPWGR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggctagcgctcactctgctgccctgtgccgttgccgtcctggtgcacttgtgg
ttggcacaacgaccctcctccaccccgctggacaacaacacacactcggatgaagcatta
cctttctatgaagttttggtgggagtgctgtcagcgagacaccattatgaactgcgacaa
gcgataagggagacctggctgggctacctccgagaccacccccacttccagcacagagtg
ggggtgaagtttatcgtgggaaaacatgggtgtcccattccagaggaggacagagaggat
ccgtactcctgctccatcctgaacttcaccgagccagggagagggcaggacgccgagatt
gagatcgtgacggtgtctgacccctcggttctcgccccctccgacgtgtcggccattgcc
ttggatttcaaagtcctccacccggtggtgatcaccaggctgggggtgtttcccagcggg
accaggcccgagcttcagaccaacgtaacggtgaagcttctccagctggaccaggaggag
gctgtggttactgctcgcttcagtgccatcagtacagggaccatggtgaacggggtgtgg
tacaaaccagtggagcagttcatcttgccaaagggttttgaggggacgctggtttgggag
agtctggactcttctggattgacgacggtcaactcctcgtctgtgcagctcaatgacgga
ggaggtgtcctcaagatctcctctattgcagagggcatattgcctcatagaagtgctctt
ggattccccggtttggctggagggttcacatttactatctacgatggagacggtctggag
gagcttctgcggggccgcccagccaggatggagcaccatgcctccaggctgaggcaggag
gacgccgccttgcagcaggagagcctgaggcacggcgacatggtgttcgtagacgtggta
gacacctacaggaatgtgccttccaaactgcttcagttctataaatggtctgtgggaaac
gctgactttaatctgctgctgaagacggatgatgattgttacatcgacgtggactcggta
ttaatgaagattgaccacaaaggtctcaagcgcagcaatttctggtgggggaatttcagg
cagagctgggcagtggatcgcatcgggaagtggcaggagctggagtacgctagtccggcc
tacccggcgttcgcctgtggctcgggctacgtggtctctcgtgacctggtccagtggctc
gccagtaatgcagagaagctgaaggcctaccagggagaagatgtgagcatggggatatgg
atggcagctgttgggccacagaaatatcaggaccccggctggctctgtgagaaagagtgc
tacctggacatgctgtcgtccccccagcacacggccgaggagctgcacatcctctgggac
aggaagagggcctgtggagacccctgcggttgcccctggggccgctaa
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