Lates calcarifer (barramundi perch): 108885889
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Entry
108885889 CDS
T04895
Symbol
si:dkey-283b15.2
Name
(RefSeq) neuronal pentraxin-1 isoform X1
KO
K25709
neuronal pentraxin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108885889 (si:dkey-283b15.2)
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Motif
Pfam:
Pentaxin
Laminin_G_3
Laminin_G_2
Nop14
Lectin_N
BUD22
Motif
Other DBs
NCBI-GeneID:
108885889
NCBI-ProteinID:
XP_050932122
UniProt:
A0AAJ8BGJ9
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Position
LG15:11103407..11109428
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AA seq
602 aa
AA seq
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MRNSQSLHLFLVPIVFSVISLLPCPGSASSGSDFDYGAHPRFVCTPIPMDTDPSCFPKEG
PGVGAAGTGGPGHQSAPPAGWWGASEEAKATILHLRESLVQQKETILDQRETIRELTAKL
TLCEGFSRAVTPHDSTASHSHHAGVASRHAYADNGHYGNQHGHHGNLIPDSPHHPSAGGQ
RSDGGHSSNIQGKDKHVTPGDITSSPEQMERMLQALKERLDNLQKRNTSITYSSSLKELL
QRKINALEQQLHHRTEALNSPDHHDDDSSSHRDDHDRDEGDHHDDDHHVDGHLNDHRDGD
HDGHKDSGNNTDHHDDSHNDDHHDADSDHDNHDNGHHDDEDDDDDDHHSNEADSHSYLPH
TGYRAPGPRAGFHSNKLDTMLNQLHLAAGSNRKKSKSPDAFQISFPMRTNYMYGRVKRTL
LQEIFALTLCLWIKPGVGPGLGTPFSYSAPGQANELVLIEWGNNPIELLIDDKAVTLPLS
VSDGKWHHVCVTWSTRDGQWEAYQDGVQRGSGINLSPWHPIKPGGVFILGQEQDTLGGRF
DATQSFVGEMSDLHMWSTVLSASDIYSLASCGSHLRGDVIAWSDTEVELHGGVARYPFDP
CH
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaggaactctcagtctctacacctgttccttgttcctattgtgttttctgtaatttca
ctcctcccctgccctggatctgccagctcagggtctgactttgactatggagcccaccca
cgctttgtttgcacccctattcccatggacacagacccttcctgcttccctaaagagggt
cctggtgtaggagcagcagggactggcggaccgggccatcaaagcgcacctcctgctggc
tggtggggggccagcgaggaggccaaagccaccatcctccacctcagggagagcctcgtg
cagcagaaagagaccatcctggaccagagggagaccatcagagagctgacagccaagctc
accctgtgcgagggcttcagccgggccgtgacgccacacgacagcacggcttcgcactcc
catcacgcaggggtggccagtcgccacgcgtacgctgacaacgggcactatggcaaccag
catggtcaccatggcaacctcataccagactcgccgcaccacccctctgcgggggggcaa
cgatcagatggaggccacagcagcaacatccaggggaaggataaacatgtgacaccaggg
gatatcacatcatcaccggagcagatggagaggatgctgcaggcgctgaaggagaggctg
gacaacttacagaagaggaacacatccatcacctactccagctcactaaaggagctgctg
cagaggaagatcaacgccctggagcagcagctgcaccatcgcaccgaggccctcaacagc
cccgatcatcacgacgacgacagcagcagtcacagggacgaccacgaccgcgatgaaggg
gaccatcatgacgacgatcaccatgttgacggacaccttaatgaccacagggatggggac
cacgatggtcacaaggacagcgggaacaacaccgatcatcatgatgacagccacaacgac
gatcatcatgatgctgacagtgaccacgacaaccacgacaatggccaccatgatgatgaa
gatgatgatgatgatgaccatcacagcaatgaagcagacagtcacagttaccttcctcac
acaggatacagagcacctgggccccgagctggtttccattcaaataaactggatacgatg
ctcaaccagctgcacctcgcagcaggttccaataggaagaaatccaagagtcctgatgcc
tttcagatcagcttccccatgagaaccaactacatgtacgggcgggtgaagaggactctg
ctgcaggagatcttcgctttgaccctgtgtctttggatcaagcccggcgtgggacccggc
ctggggacgcccttctcttactctgcccctggacaggccaacgagctggtgctcatcgag
tggggaaacaaccccatagagctgctgatcgatgacaaggcggtgacattgcccctctct
gtgagtgatgggaagtggcaccatgtgtgtgtaacctggtcaacacgggacggacagtgg
gaggcctaccaggatggagtgcagcgagggtccgggattaatctctctccctggcacccc
atcaaacctggaggggtcttcatcctgggacaggagcaggacactctcggaggccgtttt
gacgccactcagtcattcgttggtgagatgtccgacctccacatgtggtcgaccgtcctg
agtgccagtgacatctacagcctggcctcctgcggcagccacctcagaggagatgtcatc
gcatggtctgacacagaggtggagcttcacggaggtgttgccagatacccttttgacccc
tgtcactga
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