Lates calcarifer (barramundi perch): 108885913
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Entry
108885913 CDS
T04895
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108885913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108885913
Spliceosome [BR:
lcf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108885913
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
108885913
NCBI-ProteinID:
XP_018535955
UniProt:
A0A4W6FQC6
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Position
LG15:complement(11455421..11461730)
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AA seq
712 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTIDQLRPFLDDSAG
GFVERLFEALEESRSSRGNKGAGEKNRKRDLKDVFGDEAETGVVRENPVAGDGTAAKRKR
VPRFEEVEEPEVIPGPPTESPGMLTKMQIKQMMEAATKQIEERKKQLSFASSVPASPRLP
LSTPQSQMEASPVSRLLGNSAAAAAAGGASSIAPSQAASFMNDAIEKARKAAELQARIQS
QLAMKPGILGALGNTAPHNLVALANLHAMGIAPPKVEVKEVNKPTPLILDEKGRTVDASG
KEVELTHRMPTLKANIRAVKREQFRQQLKEKPGEDLESTSYFDQRVFITPAQRPRRSFRF
HEQGRFEKIAQRIRTKAQLERLQCEIAQAAKKTGIQASTKLALIAPKKEIGEGEVPTIEW
WDSYILPYNIDIKPDTYFDQLELFGVTNLVEHPAQISPPVDTDKPVTLGVYLTKKEQKKL
RRQTRREAQKEVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQ
KAHEEANAARKLTAEQRKEKKVKKLKEDITDGVHIAVYRIRNLQNPAKKFKVEANANQLY
LTGTVVLHKDVNLVVVEGGPKSQKKFKRLMMHRIKWEEHNSKRDDPDGDDDTKRNNKCWL
IWEGTAKERSFGDMKFKQCPTESMAREHFKKHGTEHYWDLALSQSVLDTTDD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaagcgggaggtggaggagctgaggccatgggtggagcgtacggtgaag
aaagtgcttggtttctcagagcccactgtggtcactgcagctttgcactgcgtgggaaaa
gggctggacaaaaggaagactatagaccagctgcgtcccttccttgatgactctgctgga
ggttttgtggagcgtctttttgaggcgctggaggagagccgtagctcccgtggcaacaaa
ggagcaggagaaaagaaccgcaagagagacctgaaggatgtgtttggtgatgaagctgaa
acaggtgtagtgcgagaaaatccggtggcaggagatgggacggcagcaaagcggaaacgg
gtccctcgcttcgaggaggtggaggagccagaggtcatacccggacctccaactgagagt
cctggcatgcttaccaaaatgcagatcaaacagatgatggaggcagccacaaaacagatc
gaagagaggaagaaacaactaagttttgcctcttcagtccctgcttcaccacggttgcca
ctttctacaccacagtcacaaatggaagcctctccagtgtcacggcttcttggcaattct
gctgctgctgcagctgctggtggtgcctcatccatcgccccctcccaggctgccagcttc
atgaatgatgctatcgagaaggcccgcaaggctgctgagctgcaagcacgcatccagtct
cagttagccatgaaacctgggatccttggagccttggggaacactgcgcctcacaaccta
gttgcgctggctaatctacatgccatgggaattgctccaccgaaagtagaggtcaaggag
gttaacaagccaacacctcttattctggatgagaagggaagaactgtggatgccagtggc
aaagaggttgaactcactcaccgcatgcccactctgaaagctaacatccgagcggtaaag
agggagcagttccgtcagcagctaaaggagaagcccggggaggacttggagtccacatcc
tacttcgaccagcgtgtgtttattacaccagctcagcgccctcgcaggagcttcagattc
cacgaacaagggcgctttgagaagattgctcagagaattagaactaaggcccagttggaa
aggttgcagtgtgagatcgcccaggcagcaaagaagacaggaatccaggcatccaccaag
ctggccctgattgcccctaagaaggagattggagaaggggaggtgcccaccattgagtgg
tgggactcttacatcctgccctacaacatagacataaaaccagacacttactttgaccag
ctggagctctttggtgtgaccaacctggtagaacatcctgcccaaattagccctccagtt
gacacagataagccagtcacactgggtgtatacctaacaaagaaagaacagaagaaactg
agaagacagactcgaagggaggcccaaaaagaagtgcaagagaaggttcgtctgggactg
atgcctccaccagaacccaaagtgcgtatctccaacctgatgagagtgctggggacggag
gcagttcaggacccgacaaaagtggaggcccatgtcagagcacagatggccaagagacag
aaggctcatgaagaggccaatgccgctcgcaaactcacagcagagcagaggaaagagaag
aaggtcaagaagttaaaagaagacatcactgatggtgttcacatcgcagtgtataggatc
cgtaacctgcaaaatcctgctaagaagtttaaagtggaggccaatgccaaccagctgtat
ttgacgggcacagtagttctacacaaagatgtcaaccttgttgtggttgagggaggcccc
aaatcccagaaaaagttcaagaggctgatgatgcacagaatcaaatgggaggaacacaac
agtaaaagagatgatccagatggtgacgacgatacaaagagaaacaacaagtgttggttg
atttgggaggggacagctaaagagcgtagttttggggacatgaagttcaagcagtgcccc
acagagagcatggccagagaacacttcaagaagcacggcacagaacactactgggaccta
gctctcagtcagagtgtgttggacaccacagatgactga
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