Lates calcarifer (barramundi perch): 108885924
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Entry
108885924 CDS
T04895
Symbol
hoxa2b
Name
(RefSeq) homeobox protein Hox-A2b
KO
K09302
homeobox protein HoxA/B2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108885924 (hoxa2b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108885924 (hoxa2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
IFT52_central
Homeobox_KN
Protamine-3
RXLR
Motif
Other DBs
NCBI-GeneID:
108885924
NCBI-ProteinID:
XP_018535978
UniProt:
A0A4W6DJY7
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Position
LG15:complement(21864890..21868447)
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AA seq
368 aa
AA seq
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MNYEFGRESGFINSQPSLAECLTSLTNPVGDAFQSSSIKNSALSRSTLIPPPFEQTIPGL
SPGVHPRHSRSKQALKGCSPVRTASLPPEYPWMKEKKSIKRSQTAAAAAASSSAAAAAAT
TTDSSPLYFSPQGSPEIPEGGVGGGGASRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVE
IAALLELTEKQVKVWFQNRRMKHKRQTHCKENRDSEGKYACLADDGPEDELFEREQEEEE
EEEEEEEEADRLMDRERYFHQNTLTSQQCHNGNNGHSQSPLSSNGKNLKHFPNPAPTVPI
CVSTIGPDNDDDSPGLDVSLQDFHVFSSSSSFSPSLSDSIQSPLPLSSETFDLFSETLTT
IDLQNLSY
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgaattcgggcgagaaagtggttttatcaacagccagccgtcgctcgctgag
tgcctgacatctctcactaaccctgtcggtgatgcatttcaaagttcatcaatcaagaac
tcggcgctttcacgctcgacactgattcctcctccttttgagcagaccatccccggcctg
agcccgggcgtccacccacgccacagccgctcgaagcaggctctgaaaggctgcagcccg
gtgcggaccgcatccctacccccggagtacccgtggatgaaggagaagaaaagcatcaag
aggagccagaccgctgctgctgctgctgcttcctcttctgctgccgctgctgctgcgaca
acgactgactcctcgcctctctacttctccccccaaggttcaccagagataccagagggt
ggtgttggcggtggaggagcatccaggaggctgaggacagcctacaccaacacccaactc
ctggagctggagaaggagtttcattttaacaaatacctgtgcagaccgaggcgggtggag
atagcggctttactggaattaacggagaagcaggtgaaagtgtggtttcagaacaggagg
atgaaacacaagaggcagacccactgcaaggagaaccgggacagcgaggggaaatacgcg
tgcctggcggacgacgggccggaggacgagttgttcgagcgggagcaggaggaggaagaa
gaggaggaggaggaggaggaggaggcggacaggctcatggacagggagaggtatttccac
caaaataccttgacttcacagcagtgtcacaacgggaacaatgggcacagccaaagccct
ttgagcagcaatgggaaaaatctgaaacattttccaaacccggcgcccactgttcctatc
tgcgtgtcaacaataggcccggacaatgatgacgattccccgggcctggacgtctctttg
caggatttccacgttttctcgtcctcctcctctttctcaccaagtttgtcagattcaatc
cagagtcctttgcctctatcatccgaaacgttcgaccttttctctgaaacactcacaaca
atcgaccttcagaacttgagttattga
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