Lates calcarifer (barramundi perch): 108885962
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Entry
108885962 CDS
T04895
Symbol
si:dkey-92i15.4
Name
(RefSeq) uncharacterized protein si:dkey-92i15.4
KO
K22628
interleukin 16
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108885962 (si:dkey-92i15.4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108885962 (si:dkey-92i15.4)
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Interleukins
108885962 (si:dkey-92i15.4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_2
PDZ_6
PA-IIL
Motif
Other DBs
NCBI-GeneID:
108885962
NCBI-ProteinID:
XP_018536034
UniProt:
A0A4W6FU56
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Position
LG15:12087774..12096284
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AA seq
1115 aa
AA seq
DB search
MDLSLLPSPASECNKQRTGARFTVRSANSPSYSLTRRPGVRKARGSSEEEREGAKGVGER
ETHGTNPGTNVTSKEEDGAAGYQAMTGCHHSVKGQCEEEETSGHEIPPKLRQNGSRGDKM
STDFGSDGSENPAFESRGRTEGRRYNWSSRSKSLDWRTDTRSPDRGTRADMLSTKSGGDI
NKQIGGLVERSMGADGVRGRVRSSVHAYNSAGTANVVRERSPVNHMSQTLDRTTRGHSLP
SRMRSQSGQGSRFAETANSFGPKGGQSILERIEKLYGSAGHGKSEDSSQQRSYERATGGT
FPRRFSSGERNSLSPVQSRKSVTWTDQKDTSGFDSLFSPGRNRKLSGGQWQGQIQGRCSE
EGGVNWGRGVAEVGTRSLDRARSRNTVAGQIRSARAAGVIIAPAESFLAEKTTFSLKDSS
GFRERRANASEDQGRAEEKGDTNGISGAKETDDGAIVKTEMKSGGTDEDVFESNPTKITL
KTTERKKYPEMLSVPSAASVKNKISQFEALSQRAQGLATGQVLIPRRALSVPTRLSWGHD
GVKKSESAKAPGGLRDRWEGLKEEGGDKSEEKVTGAGKKLVSGRSLSVDEVGLRLGGKER
EGNDLAENESKEMDGGDSCAENFGKYSRLRSTLEIPLNEGAQRRHRNFYIDETDFSKLSS
PEEGSEKDITASNTPSPLLSNSSDTSTSVQKITTSVITSPVSDDDKTPTNTPDHSPFLSP
IAPPENASFFTEAPQTPDPDSPPPLPPPLATSSQSNLSSLVFPDAGTAHRKEKKQVLDLN
AWVAGLNSEIKVWNDDEDDDEDDDESTQKDEDSNYDSDSGESSVTITSNMSQSDRRSFCV
SLSDLCNFAGVDYESENDSDEWQSPSRRSASLSSDVSALSYVSVMPSEELDRLLEDVRSL
GDNTLQDYDDVQVVVLHKEVGVGLGFSVAGGVDQNKPITVHKVFHSGVAAQEGSIREGDR
VLSINGTALCGYAHWEALRVLRRAKAREMAVVVLRRGGLSDIPKSRVQTKTFGPTETQFS
RTDQHVCVRLEKKSRDLGFSLEGGEGSSQGNRPITVQKIFLGGPVDKVCPGDEVLEIEGV
SMVGMRRLEAWTLIKKLPPGPVDVVLRRPGKHLET
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtccttgctcccttctccagcgagtgagtgcaacaagcagaggacaggagca
cgcttcactgtccgctcagctaactctccctcgtacagtctcactcgcaggccaggtgtt
aggaaagccagaggttcctctgaggaggagagggagggcgccaagggagttggagaacga
gagacacatgggacgaaccctggcacaaacgttacaagcaaggaggaggacggagcagct
ggatatcaagccatgactgggtgtcaccacagtgtcaaaggtcagtgcgaggaggaggaa
acgtccggccatgaaattccccccaagctgaggcagaatggctcaagaggagacaaaatg
agcacagattttggctctgacggaagtgagaaccctgcatttgaaagccggggcaggaca
gaggggaggaggtacaactggtcaagcagaagtaagagtttagattggaggacggacacg
agaagtcctgatcggggcaccagagcggatatgttgtcaaccaaaagtggaggggacatc
aataaacagattggaggcttggttgaaagatcgatgggagctgacggtgtgaggggcagg
gtgaggtcttctgtacatgcctataactctgcaggtacagctaatgtcgttcgagagagg
agcccagtaaatcacatgagccagactttggaccggaccaccaggggtcattctctcccc
tctaggatgaggtcccagtctggccaaggctctaggtttgcagagacagccaattcgttt
gggcccaaaggaggtcagagtatactggagcggatagagaaactctacgggtctgctggt
catggtaaatctgaggattcgtcgcagcagaggtcgtacgagagggcaacggggggaacc
ttccccaggcgtttctcatcaggagagagaaatagcctcagtccagtgcaaagcaggaaa
tccgtcacctggacggatcaaaaagatacttcaggctttgacagtttgttttctccaggg
agaaacaggaaattgtcagggggacagtggcaaggacaaatccagggcaggtgctcagag
gaaggtggggttaactgggggagaggtgtagcagaggtgggcacaaggtctctggacaga
gcaaggagtaggaacactgtagcaggacagattagatctgccagagctgcaggagtgatt
attgcacctgcagagtctttcttagcagaaaagacaacattttctctcaaagactcgtct
ggattcagagagagaagagcaaatgccagtgaggaccagggcagggcagaggaaaagggt
gacactaatggaataagtggggcaaaagagacagatgatggtgcaatagtaaaaactgaa
atgaagagtggtggcactgatgaggacgtgtttgagtcaaatccaacaaaaattacactg
aaaacaacagagaggaagaagtacccagagatgctttctgtcccctctgcagccagtgtg
aaaaataagatcagtcagtttgaggctctgtcacagagagctcagggtttggcaacggga
caggtcctgatacccaggagagccttgtctgtgccaacgcgactcagctggggccacgat
ggagtgaagaagagcgagtcagcaaaagcaccaggtggattgagggacaggtgggaaggg
ttgaaagaggaaggaggtgataaatctgaagagaaagtgacaggagcagggaagaagctt
gtgtcagggaggtctctgtcagtggacgaggttggactaagattaggggggaaggagaga
gaggggaatgacttagctgagaatgaaagcaaagaaatggatggtggagacagttgtgct
gaaaattttggtaaatattccagactcaggagtacacttgaaattcccctgaatgaagga
gctcaaagacgccacagaaacttttacatagacgagacagatttctccaaactctcaagc
cccgaggagggaagcgagaaagatatcacagccagcaatacaccgtccccgttactgtct
aattccagtgacacctcaactagtgtgcagaaaataacaacctctgtgattacctctcct
gttagtgatgatgacaagactccaacaaacacccctgaccactcgccttttctatcaccc
atcgcacctccagaaaatgcctctttcttcacagaagctcctcaaactcctgatccggac
tccccaccacctctccctcctccactcgccacctcctcccaaagcaacctctccagtctg
gtctttccagatgcgggcacagcccaccgcaaagagaagaaacaggtgttggatctgaat
gcttgggtagccggcttgaactcagagatcaaggtctggaatgatgatgaagatgatgat
gaggatgatgatgaaagcacgcagaaggacgaggattcaaactacgattcagactctgga
gagtcctctgtgaccatcaccagtaacatgagtcagtctgatcgtaggagcttctgtgtt
agcctttcagacctgtgtaactttgctggagttgactatgagtcagagaatgacagcgat
gagtggcaatcaccaagtcggcggtctgcttcactgagctctgatgtgtctgccctctcc
tatgtgtcagtgatgcccagtgaggagcttgacaggctgctggaggatgtcaggagcctg
ggggacaacaccctgcaggactatgatgatgtgcaggtggtggttcttcataaggaggtg
ggagtgggactgggcttcagtgtggcaggaggcgtggaccagaacaagccaattactgtt
cataaggtttttcactcaggtgtggcggctcaggaaggctccataagggaaggggacagg
gttttgtcgatcaacggcacagcgttgtgcggctacgcccactgggaggctctgagggtg
ctgagaagggcgaaggctcgtgagatggctgtggtggtcctgagaaggggggggcttagt
gacatccctaagagtagagtgcagacaaaaacttttgggccaacagagactcagttcagc
aggacagatcagcatgtgtgtgtgcgtctggagaagaagagcagggatctgggcttcagc
ttggagggaggtgaaggctccagtcaggggaacagaccaatcactgtacagaagatcttc
ctgggaggtccagttgacaaggtgtgtcccggtgatgaggtcctagagattgaaggtgtg
agcatggtggggatgaggcgcctggaagcctggactttgatcaaaaaactcccccccggg
cctgtggacgtggtgttacgtcgccctggtaaacatctggaaacatga
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