Lates calcarifer (barramundi perch): 108885987
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Entry
108885987 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat neuronal protein 1-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108885987
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
108885987
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_1
ig
LRR_EndoS
V-set
fn3
Ig_2
Pur_ac_phosph_N
LRR_NXF1-5
LRRCT
Sp38
LRRNT
Motif
Other DBs
NCBI-GeneID:
108885987
NCBI-ProteinID:
XP_018536082
UniProt:
A0AAJ7V4L7
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Position
LG12:21106749..21117856
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AA seq
715 aa
AA seq
DB search
MVLSSQPWPPLIWLCMGLLLPFLSPIHGKECPCLCVCEIRPWFTPQSTYKEATTVDCNDL
RLTHIPTNLSTDTQVLLLQSNAISHTSGELEALFNLTELDLSQNNFSTVEAVGLTNMNHL
TTLHLEENQISQLPDHCLGNLSNLQELYINHNQISSISPLAFAGLHSLLRLHLNSNKLHV
IDSRWFEETPNLEILMIGENPVIGLLDMNFKPLGSLRSLVLAGMDLTDVPANAFVGLDNL
ESISFYDNKLVRIPQLSLQRVPNLKFLDLNKNPVQKIQEGDFRNMLRLKELGINNMMELV
SIDRYALDNLPELTKLEATNNPKLSYVHQFAFRDMPSLESLMLNNNALTALYQHTVEVLP
NLREISLHSNPLRCDCVIQWMSSNRTTVRFMEPLAMLCNSPAELKDQRVRELRLLESSEQ
CLPLISHDTFPSHLNLELGMSVSLDCRAMAEPEPEIYWVTPLGTKITIDTVSDRYHLSNE
GTLRLSHVQVEDSGRYTCVAQNTEGADTRVATIRINGTLLDSAQVMKIFVKQTESHSILV
SWKVNSNVMSSNLKWASATMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEVCLTVSNV
HLQTHKSCVNVTTRSATFALDLSDQHPSAAVLAVMATMLAFLSLATVGVYMARRWKRKNY
HHSLKKYMLKTSSIPLNELYPPLINLWEADGDKDKDSSTEGKPSPVDTTRSYYMW
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcagctctcagccttggcctcctttaatctggctgtgcatgggattgcttctt
ccctttctgtcgcccatacacggcaaagaatgtccttgtttgtgcgtatgtgagatccgc
ccttggttcaccccccagtcaacctacaaggaggcaaccacagtggactgcaatgacttg
aggctcacacacatccctaccaacctgtcaacagatacccaggtgttactgctccagagt
aatgctatctcacacaccagtggagagctggaagcgctgttcaacttgactgagttggac
ctatctcagaacaacttcagcactgtggaagcagtgggcctcacaaacatgaaccacctg
accactctgcatttagaggagaaccagatcagtcagctgccagaccactgcctgggaaac
ctctccaacctccaggagctctacatcaaccacaaccagatcagttccatctctcctctg
gcgtttgcaggcctgcacagcttactgcgccttcatcttaattccaataagctccatgtc
attgacagccgctggtttgaagaaacacctaaccttgagatcctcatgatcggggagaac
ccagtcattggcctcctagacatgaactttaagcctctaggaagcctgaggagtctggtt
ctggctggcatggacctcactgacgtgccagcgaatgcatttgtaggtttggataacctg
gaaagcatttctttctatgacaacaaactggtcagaatccctcagttgtccctacagaga
gttcccaatctgaaattcttggatttaaacaaaaatccagttcagaaaatccaggaagga
gacttcaggaacatgctacgtctgaaggagttgggcatcaacaatatgatggagttagtg
tcaattgaccgctatgctcttgacaacctaccagagctgacaaagctggaggcaacaaac
aaccctaagctgtcttatgtccatcagtttgcgtttagggacatgccctctctggagagc
ctgatgctcaacaataacgccctcactgctctttaccaacacactgtggaggtattgccc
aatctgcgggagatcagtctgcacagcaacccattgcgctgtgattgtgtcattcagtgg
atgagttctaacaggaccacggtacgcttcatggagcccctggccatgctgtgcaactcc
ccagcagaactcaaggaccagcgggttcgagagttaaggctgttggagtcttcagagcag
tgcctccccctcatatcccacgacaccttccccagccacttgaacctcgagttgggcatg
agtgtcagtcttgactgcagggccatggcagagccggagccagagatctactgggtgact
ccacttgggaccaaaatcactatagacactgtgtcagaccggtaccacttgagcaatgag
gggaccctgcggctgtctcacgtgcaggtggaagattctggtcgctacacctgtgtggcc
cagaacacagagggggctgacacaagagtggccaccatccgtataaatggcacccttctt
gatagtgcccaggtgatgaaaatctttgtcaagcagactgaatcccactccatcctggtg
tcctggaaagtcaactcaaatgttatgtcctccaatctgaagtgggcctcagccaccatg
aagatcgacaacccgcacatcacctacacagctcgcgtccccgtagacgttcatgagtac
aacctcacgcaccttcagcccgccactgagtatgaggtatgcctcacggtctccaatgtc
cacctgcagacgcacaagtcttgcgttaatgtgacaacacgtagcgccacctttgccctg
gatctgtcagaccagcacccaagtgcggctgtgcttgctgtcatggcaaccatgctggcc
ttcctcagtctggccactgtgggcgtctacatggcccgcagatggaagagaaaaaactac
caccactctctgaagaaatacatgctgaagacctcctccatcccccttaatgagctttac
cctccactcatcaacctgtgggaggctgatggtgacaaagacaaagatagcagcacagaa
ggaaaaccctctcccgtcgacaccacacgtagctattacatgtggtga
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