Lates calcarifer (barramundi perch): 108885990
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Entry
108885990 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: electroneutral sodium bicarbonate exchanger 1
KO
K13859
solute carrier family 4 (sodium bicarbonate cotransporter), member 8
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108885990
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC4: Bicarbonate transporter
108885990
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HCO3_cotransp
Band_3_cyto
CPT
Motif
Other DBs
NCBI-GeneID:
108885990
NCBI-ProteinID:
XP_018536091
UniProt:
A0AAJ7PQQ2
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Position
LG12:21206876..21236012
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AA seq
1088 aa
AA seq
DB search
MPVNDPESILSYQRPDEEVVVDQGGTSSVLNIHYEKEELEGHRTLFVGVRMPRQSHRHHK
AHGSRHRKRDRKSGSISIQQSEGSETTTSTHDTPSQRVQFILGTEEDAEHVAHELFTELD
EICVKDGKDAEWKETARWLKFEEDVEDGGERWSKPYVATLSLHSLFELRSCIINGSVLLD
MHADCIEEIADMVLDHQEASHELDDSVRVKVREALLKRHHHQNEKKKNLIPIVRSITEGT
RKQSEPHLTATSPQPPPATEQAKNGAGQDGTQVDLSKVDLHFMKKIPEGAEASNVLVGEL
DFLERPIVAFVRLSPAVLLTGLTEVPIPTRFLFILLGPDGKAQQYHEIGRSMATIMTDEI
FHDVAYKAKDRSDLLAGIDEFLDQVTVLPPGEWDPSIRIEPPKSVPSQEKRKQPGVPNGT
ACQVEEELHAEHHGPELQRTGRLFGGLILDIKRKAPFYLSDFKDGLSLQCVASFLFLYCA
CMSPVITFGGLLGEATEGRISAIESLFGASMTGVAYSLFAGQPLTILGSTGPVLVFEKIL
FKFCKDYDLSYLSLRTCIGLWTALLCLVLVATDASSLVCYITRFTEEAFAALICLIFIYE
ALEKLFHLGEIYPFNTHSDLDKLTLAYCRCAEPDNPSNKTLELWSERNVTASAVSWANLS
VKECISLQGHFVGTACGHHGPYTPDVLFWSTILFFSTFFMSAFLKQFKTSRYFPTKVRSM
ISDFAVFLTIVIMVLLDYAIGVPSQKLKVPSKFQPTRDDRGWLINPIGRNPWWTVLAASI
PALLCTILIFMDQQITAVIINRKEHKLLKGCGYHLDLLMVAVMLAVCSIMGLPWFVAATV
LSISHVNSLKLESESSAPGEQPRFLGIREQRLTGLVIFLLMGCSVFMTGALQFIPMPVLY
GVFLYMGVSSLKGIQFFDRLKLFGMPAKHQPDFIYLRHVPLRKVHLFTLTQLTCLVLLWI
IKTSPAAIIFPMMVLALVFIRKLLDLCFSKRELSYLDDLMPEWKKKNLDDASKKIEEESQ
VMLSAKQEDSATVQIPMESSKPVQTLKAHDPRCDPSDINISDEMSKTTVWKSLNSNPKDS
RPVAAKKD
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcaacgaccccgagagcatactgagctaccagaggccagatgaggaggtggtg
gtagaccagggaggcacaagctcagtgctgaacatccactatgagaaggaggaactagaa
ggccacaggactctgtttgtcggggttcggatgccgaggcagagccatcgtcaccacaag
gcccatggctctcgccaccgcaagagagacagaaagtcaggaagtatctctatacaacag
agcgagggaagtgagacgaccacctccactcatgacacgccgtcccagagggtccagttc
attctgggcacagaggaggatgctgaacatgtggcccacgagctgttcactgagctggat
gagatctgcgtgaaggatggcaaggatgctgagtggaaggaaacagccaggtggctgaag
tttgaggaggacgtggaggacggcggggagaggtggagcaagccctacgttgctaccctc
tccctccacagcctgtttgagctccgcagttgcatcatcaatggcagcgtgctgcttgac
atgcatgctgactgcatcgaagagattgccgacatggtgctggaccaccaggaggcgtcc
catgagctggacgacagtgtgagggttaaagtgcgcgaggctctgctgaagagacaccac
caccagaacgagaagaagaagaacctgattcccatcgtacgctccatcacagagggaacc
cgcaaacagtcagagccccatctgacagccacatctccccagcctcctccagctacagaa
caagctaaaaacggtgctggacaggacggcactcaggtggacctcagcaaggtggaccta
cacttcatgaagaagatcccagagggcgcagaggcctcaaatgtgttggtgggagagctg
gacttccttgagaggcccattgtggccttcgtccgcctctcccctgctgtgctgctcacc
ggcctcactgaggtgcccatacctaccaggttcctcttcattctcctgggcccagatgga
aaggctcagcagtaccatgaaattggacgctccatggcaaccatcatgacagatgagatc
ttccacgatgtagcgtacaaggcaaaggacagaagtgacctgctggcagggatagatgaa
ttcctggaccaggtgactgtcctaccaccaggggagtgggacccctccatccgcattgag
cctcctaaaagtgtcccctctcaggagaagagaaaacagcccggagtccctaatggtaca
gcctgccaggtagaggaagaactacatgctgagcaccatgggccagagctgcagagaact
ggaaggttgtttggtggtctgatactggacatcaaaaggaaagctcctttctacctgagc
gactttaaggacggtctgagcctccagtgtgtggcctctttcctcttcctctactgtgcc
tgcatgtctcctgtcatcacctttggaggactgctaggggaggccacagagggacgcatt
agtgccattgagtccttatttggtgcatctatgactggggtggcctactctctgtttgcc
ggtcagcctctcaccattctgggcagcacaggtcctgtgctggtttttgagaaaattctc
ttcaagttctgcaaggactacgacttgtcctatctgtcgctgaggacctgcatcggcttg
tggacggccctgctgtgtttggtgttggttgccacagacgcaagctctctggtgtgctac
atcactcggttcacagaggaggcctttgctgccctcatctgcctcatcttcatctacgag
gctttagagaagctgttccatctgggagaaatctaccctttcaacacacacagcgatctg
gacaaactcacactggcatactgcaggtgtgcagaacctgataatcccagtaataaaacc
ttagagctgtggagtgagagaaacgtgacagcatctgctgtatcctgggcaaacctttct
gtcaaggagtgtatcagtctgcagggccactttgttgggacggcgtgtggccaccatggc
ccctacaccccagatgttctcttctggtctaccatcttgttcttctcgaccttcttcatg
tctgcctttctcaagcagttcaaaactagccgttatttccccaccaaggtgcgctcaatg
atcagtgactttgcagtgttcctcaccattgtcatcatggttctgcttgactatgccatt
ggagtgccctcccagaagttgaaggtgcccagcaaattccagcccaccagagatgatcga
ggttggcttatcaatccaataggacgcaacccatggtggacagtcttggcagcctctatc
cctgctcttctctgcaccatccttatcttcatggaccagcagataactgccgtcatcatt
aaccgcaaggagcacaaactgctgaagggttgtgggtaccacctcgacctgttgatggtg
gcggtgatgctggcggtgtgctccatcatgggcctgccctggttcgtggcggccacggtc
ctgtccatctctcacgtcaacagcctgaagctggagtcagagagctcggctcctggggag
cagcctcgcttcctgggcatcagagagcagaggctcactggcctggtcatcttcctgctc
atgggctgctctgtattcatgactggagccctgcagttcattcctatgccagtgctgtat
ggtgttttcctttacatgggagtatcatcattaaaaggcatccagttctttgaccgtctg
aagctgtttggcatgccagcgaagcatcagccagacttcatctacctgcgccacgtcccc
ttgaggaaggtgcacctgttcacgctcactcagctcacctgtctggtgctgctctggatc
ataaagacttcgcccgctgctatcatcttccccatgatggtactggctctggttttcatc
cgcaaactgctggacctctgcttctctaagcgagagctgagttacctggatgacttaatg
cctgaatggaagaaaaaaaatcttgatgatgcctccaaaaagatagaagaggaatcacag
gttatgctcagcgctaagcaggaagattcagccactgttcagattcccatggagagcagc
aagcctgttcagaccctaaaagcacatgaccccaggtgtgacccctctgacattaatata
tctgatgaaatgtctaaaaccactgtgtggaaatccctcaactccaatccaaaggactct
cgtcctgtggctgctaagaaggattga
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