Lates calcarifer (barramundi perch): 108885992
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Entry
108885992 CDS
T04895
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108885992
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
108885992
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
108885992
NCBI-ProteinID:
XP_018536095
UniProt:
A0A4W6FET8
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Position
LG12:21193568..21197486
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AA seq
428 aa
AA seq
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MERIPSAQPPPLSKHQADLSDVQGMDYPMYVYKPRRGMKRGEESKETYKLPHRLIEKKRR
DRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTSLLEQQQQKILALQNGM
QIEQPPVSQEKSEEMFRSGFHMCAKEILQYLANHETDGDFAPSHMISHLHKLAAEVLQGP
ARPRTPLSPRREEIPTYHQHQPHKEVHTSLPPKPSEGYGRNCVPVIQRVYAPPSGEQSGS
DTDTDSGYGGELEKNESGVQQGRPDYYGKESQLKRVLGEQQSSGIKQEDDEPRPKRPRVE
SSEDELLSGGESSASSSSSGYSSYMSMSPNHPPPPHPLCMPFYLIPPSAAAYLPMLEKCW
YPGAMPMLYPGVGGSAPAISSERPPPPQLVLSPRGGSPAPAISQTPMDSPALLQALKQVP
PLNVETKD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaattccaagcgcgcaaccaccccctctgtctaaacaccaggcggatctgtca
gacgtgcaggggatggattacccgatgtatgtttataaacccagacgaggaatgaagaga
ggagaggagagcaaggaaacctacaagctgcctcacagacttattgagaagaaaaggcgt
gaccggataaacgagtgcatcgcgcagctgaaagatttattaccagagcacctgaaactc
acgactctgggccacctggagaaggctgtggttttagagcttacactcaagcatgtgaaa
gccctcacctctcttctggagcagcagcagcagaagatcctcgccctgcagaatggcatg
caaatcgagcagcctcctgtcagccaggagaagtcagaggagatgttccgctctggcttc
cacatgtgtgccaaggagattcttcagtatctagccaatcatgagaccgatggagacttt
gcaccgtctcatatgatcagtcaccttcacaagttggctgctgaggtcctgcaaggtcct
gcccgaccccgcacccccctcagcccccgacgtgaagagatccccacctaccaccagcac
cagccacacaaggaggtgcacaccagcttaccccctaaacccagcgagggctatgggagg
aactgtgtgcccgtcatccagcgggtgtatgccccaccgagcggcgagcagagtggcagc
gacacggatacagacagtggctatgggggggaactggagaagaatgagtctggggtgcag
cagggacgcccagattactatggcaaggagagccagctgaagcgagtgcttggagagcag
cagagctcaggcatcaagcaggaagatgatgagccacgccccaaacgaccccgggtagag
tcatccgaggatgagctgctctcaggtggggagtcgtcagcttcatcgtcctccagtggt
tacagcagttacatgagcatgtcccccaaccacccacctcctccacatcccctctgcatg
cctttctacctcattccgccctcagctgcggcctacctgccaatgctggagaaatgctgg
taccccggggccatgcccatgctttaccctggtgtgggaggctccgcacccgccatatcc
agcgaaagaccacccccacctcagctagtgttgtctcccaggggaggttctccagcccct
gccatatctcagacccccatggactcccccgccctccttcaggcactaaagcaggtacca
cccctcaacgtggaaaccaaagactga
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