Lates calcarifer (barramundi perch): 108886046
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Entry
108886046 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: nodal homolog 2-A-like
KO
K04666
nodal
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108886046
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108886046
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108886046
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Transforming growth factors (RSTK binding)
108886046
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Stb3
Motif
Other DBs
NCBI-GeneID:
108886046
NCBI-ProteinID:
XP_018536177
UniProt:
A0AAJ7PQV6
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Position
LG9:7276465..7278355
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AA seq
323 aa
AA seq
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MNNSNQFSLLLCFSGCRQIGKRWSVTFDMSSISASDNVQLVELRIRLPAFTESSRASVDI
YHSHRDQCSSTQCPENRLFLGRLKVYPSAMVSPSSWKVFNMTEVLRRWLQQEHPAQRVME
EEDEAEVRDEDGEXRRGVQHLTADRVMMVVFSRQSQRTQTLIRTAEHSKYVSLDRERATA
GLSSRARSHRAKRHHQTQQQRRRVAAAAPAEKPTEEERKGPLCRKVDMWVDFEKLGWSEW
IVYPKRYNAYRCEGSCPTPVDETFTPTNHAYMQSLLKLHHPDKVPCLSCVPTRLAPLSML
YYENGKMVMRHHENMVVEECGCH
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaataattctaaccagttttctttactcctgtgtttttcaggctgccgtcagattggc
aagaggtggtctgtcacctttgacatgtcctccatatctgcaagcgacaacgtccagctg
gtcgagctccgcatccgccttcccgctttcacagagtcctcccgagcctcagttgatatc
taccactcccacagggaccagtgctccagcacgcagtgcccagagaacaggctgttcctg
ggccgcctgaaagtttaccccagtgcgatggtgtccccctcatcctggaaggtgttcaac
atgacggaggtgctgcgccgatggctgcagcaggagcaccccgcccagagggtgatggag
gaggaggacgaggctgaggtgagagatgaggacggagagnncaggagaggggtccaacac
ctcacagccgaccgggtcatgatggtggtcttctcaaggcagagccagcgaacgcagacg
ctcatccgcacagccgagcactccaagtacgtcagcctggacagggagcgggcgacagcc
ggcttgagctccagggcgaggagccacagggccaagaggcaccaccagacccagcagcag
aggcggagggtggcagcagctgctcctgctgagaagcctacagaggaggagaggaagggt
cctctctgcaggaaggtggacatgtgggtggactttgagaagctcggctggagcgagtgg
attgtttatccgaaacgctacaatgcctatcgctgtgaggggagctgtcctacaccagta
gacgagaccttcaccccaaccaaccatgcatacatgcagagcctactgaagcttcaccac
ccagacaaggtgccatgcctgtcctgtgtgccgacacgcctggcaccactttctatgttg
tactacgagaacggaaagatggtcatgaggcatcacgagaacatggtggtggaggagtgc
ggctgccactga
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