Lates calcarifer (barramundi perch): 108886052
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Entry
108886052 CDS
T04895
Symbol
nefla
Name
(RefSeq) neurofilament light polypeptide
KO
K04572
neurofilament light polypeptide
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108886052 (nefla)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108886052 (nefla)
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108886052 (nefla)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
108886052 (nefla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
108886052
NCBI-ProteinID:
XP_050928806
UniProt:
A0AAJ8BAM9
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All DBs
Position
LG9:complement(7383372..7386486)
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AA seq
664 aa
AA seq
DB search
MSSLGYDPYYSTSSYRRWYAEPSPRVVVTRGRTHSIYSSHAAPLSSSRLQYSSPGRVLLS
SSSPASSLELELSQAAQISSEFRAVRTQERSQLQELNDRFAGFIERVRELEQQNRALEAE
LMLLRQRHTEPSRLRALYEQEARSLRAAMDEARAEQQAVLGQRERLEQTLSALQGRYEEE
VLAREEAEGKLMEARREADQAALAKAELEKSVETMLEELAFLKRIHEGEVAELQAQVQLG
VQVAVESEAATPDLSGALRDIRSQYERLAARNMQAAEEWFRGKVGSLTETVAQHSDAVRS
SKDEAGEYRRQLQTRLLEIDACRGLNESLEKQLHEMEEKQSAEIAAMQDTIAELESELRG
TKQEMARYLKEYQDLLNVKMALDIEIAAYRKLLEGEESRFSVGVAGGVSSLYSHSLSAPS
FARPVLSSLSSGTSYLMTSRLLSSVSTTEGIISASQAQQAEASPPAEEEEEQEAAEEEEV
KEEEEAEKEEEGGEEETEEKKEGEEEEKEEEGGEEEGGEEEEKGDEEEAKEGDEEAKGEE
EGGDEEEEQKEEVTEAAEEEAEKDDKGEAEEAEAKEEALEEEKTGEADDKEEDTKEEEKE
EKEDAKKSEEKEDKADAKKEEKADDKDEKTAPKTDDKAEAKKEKDEEKATKPEAAEEKST
KDKK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcctcggatatgacccctactattccacctcgtcgtatagacgctggtatgcc
gagccgtcccctcgtgtggtggtgaccagagggaggacccactccatctactcctcccat
gccgcccctctgtcctcctcccgtctgcagtactcctctcccggccgagtgctgctctcc
tcctcctcaccagcttcttccctggagctggagctcagccaggcagcccagatcagctcc
gaatttcgtgccgtacgcacccaggagcgcagccaactgcaggagctcaatgaccgcttt
gctggattcatcgagagggtgcgtgagctggagcaacagaaccgtgctttggaggcagag
ctgatgctgctgaggcagaggcacactgagccgtcccgccttagagcactgtacgagcaa
gaggcccgttccctgagagctgctatggatgaggccagggcagaacaacaggctgtcctg
ggccagagagagcgactggagcaaaccttgagtgccctgcagggtcgatatgaggaggag
gtgctggctcgtgaagaagctgaaggcaagctgatggaggcacgtcgtgaggccgaccag
gctgccttagctaaggctgagctggagaagagcgttgaaactatgctggaggagctggcc
ttcctcaagaggattcatgaaggtgaggtggccgagcttcaggcccaagtccagctgggt
gtccaggtggctgtagagtctgaggccgccactccggatctctctggggctctcagggat
atccggtctcagtatgagaggctggcagcaaggaacatgcaggcagctgaggaatggttc
agagggaaggtgggctccctgactgaaactgtggcccagcacagtgatgccgtgagaagc
tccaaggacgaagcaggagagtaccgacgccagctccagacccgcctgctggagattgat
gcatgcagaggcctcaatgaatccctggagaagcagctgcacgagatggaggagaagcag
agcgcagagatagctgctatgcaggacaccattgcagagctggagagcgagctgagggga
accaaacaggaaatggcacgctacctgaaggagtaccaggaccttctgaatgtcaagatg
gcactggacattgagattgctgcatacaggaagctgctggaaggggaggagtctcgcttt
agtgttggagtggctgggggcgtgtcctctttgtacagccacagtttgtcagcgccctcc
ttcgcccggccagtcctctccagcctgagctccggcacctcctacctgatgacatcacgc
ctgctcagctcagtcagcaccaccgaggggatcatctctgccagccaggcccagcaagca
gaggctagcccacctgcagaggaggaggaggagcaggaggctgcagaggaggaggaggta
aaggaggaagaggaggcagagaaggaggaagagggaggagaggaggagacggaggagaaa
aaagagggagaagaagaggagaaggaggaagagggaggagaagaggagggaggagaagaa
gaagagaaaggagatgaagaggaagctaaggaaggagatgaagaggctaagggggaagag
gagggtggtgatgaggaggaggagcaaaaagaggaggtgacagaggctgctgaagaggag
gctgagaaagatgacaaaggagaagcagaggaggctgaagcaaaagaagaagcactagaa
gaggaaaaaacaggggaagctgatgacaaagaagaggatacaaaagaggaagaaaaagag
gagaaggaagatgcaaaaaagagtgaggagaaagaagataaagctgatgccaagaaagaa
gaaaaagcagacgacaaagatgagaagaccgctccgaaaacagatgacaaagctgaagcc
aaaaaggagaaagatgaggaaaaagcaaccaagcctgaagctgcagaggagaagagcaca
aaggataagaagtaa
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