Lates calcarifer (barramundi perch): 108886089
Help
Entry
108886089 CDS
T04895
Name
(RefSeq) transforming growth factor beta-2 proprotein
KO
K13376
transforming growth factor beta-2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04068
FoxO signaling pathway
lcf04110
Cell cycle
lcf04218
Cellular senescence
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108886089
04350 TGF-beta signaling pathway
108886089
04068 FoxO signaling pathway
108886089
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108886089
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108886089
04218 Cellular senescence
108886089
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108886089
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108886089
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Transforming growth factors (RSTK binding)
108886089
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Growth factors/receptors
108886089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
CBM96
SPEG_u2
Motif
Other DBs
NCBI-GeneID:
108886089
NCBI-ProteinID:
XP_018536241
UniProt:
A0A4W6C0L7
LinkDB
All DBs
Position
LG15:13978749..14024086
Genome browser
AA seq
415 aa
AA seq
DB search
MNLCIVSLFLTLDLATVALSLSTCSTLDMDQFKKKRIEAIRGQILSKLKLTSPPEDFPEP
EEVSRDIVAIYNSTRDLLQEKANERAATCERQRSEEEYYAKEVHKIDMQPFYPSENVISP
THFNPYFRRLTFDVSSMEKNASNLVKAELRIFRLQNPVARVSEQRIELYQILGHKDLTSP
TQRYIDSKVVRTQTEGEWLSFDVTEAVSEWLNHRDRNSGFKISLHCPCCTFVPSNNYIIP
NKSEELEARFAGIDDSFIHGGDLKGFKRRRHSARAPHLLLMLLPSYRLESQSQSPHKNHR
SKRALDAAYCSKNVQDNCCLRSLYIDFKKDLGWRWIHEPKGYEANFCAGACPYLWSADTQ
HSKVLGLYNTINPEASASPCCVSQDLEPLTILYYIGKTPKIEQLSNMKVKSCKCS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtgtatcgtcagtcttttcctcactttggatttagccaccgtggcgctcagt
ttgtccacatgcagcacgctggacatggatcagttcaagaagaagcgcatcgaggccatc
cgggggcagatcctgagcaaactaaagctcactagccctccggaggacttccccgagccc
gaggaggtgtctcgggacattgtcgccatatacaacagcacccgggacctgctgcaggag
aaggcgaacgagcgggcggcgacgtgcgagcggcagcggagcgaggaggagtattacgcc
aaagaggtgcacaagattgacatgcagcccttctacccgtcagagaatgtcatctctccc
acacacttcaacccttacttcaggcggctgacgtttgacgtgtcctccatggaaaagaac
gcatccaacctggtgaaggctgagctcaggatcttccgtcttcaaaaccctgtggcccga
gtgtcagagcagcgcatcgagctctaccagattttaggacacaaagacctgacatcccca
acacagcggtatattgacagcaaggtggtacgaacacagacggagggagagtggctgtcc
tttgacgtcacagaggcagtgagtgaatggctgaaccacagagacagaaacagtggattc
aagatcagcctgcactgcccatgctgcacatttgtaccatcaaataactacattattccc
aacaagagtgaggagctggaggcacggtttgcaggtattgatgacagcttcatccatggt
ggtgacctgaaggggtttaagaggcggcggcacagtgctcgggctccacacctcctcctc
atgctgctgccttcataccggctggagtcccagtcccagtccccgcacaagaaccatcga
tccaagagagccctggatgccgcctactgctccaaaaatgttcaggacaactgctgctta
cgctccctctacatcgattttaagaaggacctgggctggaggtggatccatgagccaaag
ggatacgaggcaaacttctgtgccggggcgtgtccatatctgtggagtgccgacacccag
cattcaaaggtgttaggtctgtataacaccataaaccctgaagcatcagcatctccctgc
tgcgtctcccaggacctggagcccctcaccattctctattacatcggcaagacccctaaa
atagagcagctctccaatatgaaggtcaagtcctgcaagtgcagctag
DBGET
integrated database retrieval system
