Lates calcarifer (barramundi perch): 108886096
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Entry
108886096 CDS
T04895
Symbol
vegfaa
Name
(RefSeq) vascular endothelial growth factor A-A isoform X1
KO
K05448
vascular endothelial growth factor A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04020
Calcium signaling pathway
lcf04370
VEGF signaling pathway
lcf04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108886096 (vegfaa)
04370 VEGF signaling pathway
108886096 (vegfaa)
04020 Calcium signaling pathway
108886096 (vegfaa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108886096 (vegfaa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108886096 (vegfaa)
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108886096 (vegfaa)
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Growth factors (RTK binding)
108886096 (vegfaa)
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Growth factors/receptors
108886096 (vegfaa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VEGF_C
PDGF
ComZ
Motif
Other DBs
NCBI-GeneID:
108886096
NCBI-ProteinID:
XP_018536246
UniProt:
A0A4W6C7X4
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Position
LG15:13808381..13821474
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AA seq
201 aa
AA seq
DB search
MTIQDSPYGITTMNFVVSLVQFLLAAVLHLPTVKTASINKGVEKSKNEVIPLTEVLNKSM
CQPREVLVDISHEYPEDTEHTFIPSCVVLNRCGGCCNDEALECIPTETRNVTLQVMRLRP
MVTQHTIHLSFTEHQKCDCRAKPDVQVKKEYHCAPCSGRRKRLFVQDPLTCKCSCKFTQL
DCKSRQLELNERTCRCDKPRR
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgacaattcaagactcaccgtacggaattacaaccatgaactttgttgtcagtttggta
caattcctgttggcagcggttcttcaccttcccactgtaaagactgccagcattaataag
ggagtggagaagagtaaaaatgaggtcatccctctcactgaggtcctcaacaagagtatg
tgtcagccaagggaggtgctggtggacatctcgcacgagtatccggaggacacggagcac
accttcatcccttcctgtgtggtcctcaaccgctgtggaggctgctgcaatgatgaagcg
ttggagtgtattcccacagaaacccgcaatgtcacgttgcaggtaatgcggttgagacca
atggtaacgcaacatactattcacctaagtttcacagaacatcaaaagtgtgattgcaga
gcgaagccagatgttcaagtaaagaaagaataccactgtgcgccttgctcagggagaagg
aaacgcttatttgtgcaggaccctctcacctgtaaatgttcctgcaaattcacacaatta
gactgcaagtccaggcaacttgagttaaacgaaagaacttgcagatgtgacaaaccaagg
agatga
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