Lates calcarifer (barramundi perch): 108886145
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Entry
108886145 CDS
T04895
Symbol
abca3b
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108886145 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108886145 (abca3b)
Transporters [BR:
lcf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
108886145 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_22
AAA_15
SRP54
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
108886145
NCBI-ProteinID:
XP_018536341
UniProt:
A0A4W6G916
LinkDB
All DBs
Position
LG11:complement(10213002..10240274)
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AA seq
1708 aa
AA seq
DB search
MAIMRQFGLLVWKNYLQQKRQILVTLVEILLPLLFSGILIVLRQKVPFKDYPNATIYESY
AVDTLPKRFLQHLQLAYVPGNSSVVRQVAEDVRGSLFLSSVRGFETEEQFEEYVRNDPLS
GKLLAAVVFEHPFSHDDEPLPLRVSYHLRFSFTPRNAPPKEKSELNPNSDLDWHTLSLFP
LFQLPGPREQYDKEGGTPGYFREGFLAVQHAVDRAIMRSYNRTAAAPLLRQIRVVLSRFP
YPAFIYDVFILAIQNQLPLVLVLSFTYTSLNIVRAVVQEKERKLKEYMRMMGLSNWLHWS
AWFLMFFLFLSISVFFVTVLLCIQVSPNGAVLTYSDPTLVFVFLLVFTVATINFSFMISA
FFSRANVAAAAGGFIYFMSYLPYLFLWPRYDLLSHAQKVSACLISNVAMAMGAQLIGMFE
GKGTGIQWCNLFDSVTVDDDFSLAQVLGLLLFDSVLYGLVAWYMEAVFPGEYGVPLPSYF
FVLPSYWCSSPRMALVNEKEEEEDAEKALKGEFIEEEPAGLVSGIKIKHLVKEFKVGHKT
RKAVRDLTLNMFEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYINGYDICQDMALIR
RSLGLCPQHDVLFDNLTVREHLLFYAQLKGYSKDKIPDEVDRIIRILNLEDKRQARSKTL
SGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHFMDE
ADLLGDRIGIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDALCNVSEITRLVHMYVPNAT
MESSAGAELSYILPKESTSRFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKLVDS
SLDIQAIQLPALQYQHERRSHDWTTDDASSISGMTDVTDFTDSGTLISEDCSNIKLNTGV
RLHLQQFYAMFLKRALYSWRNWKVMVAQFLVPLVFTVVALVVARTFPNHRDATQLRLALS
RYGPTRVPLALQPGAGPLASALAKAYSSQLPAQLGQLVNITDFTDYILTQAEEEGGSFNE
RCVVGAAFRGSSSLYAEATAYFNNEGYHTPATALMMVDNALFKLLAGPNASIQTGNYPMP
RNMSEIAQSQLTEGKTGFAIAINLMYGMASLSSTFALLLVTESSIKSKHVQQVSGVYLSN
FWFSALLWDLVNFLLPCLLMLVVFQAFGVKAFVEDNHLVDVLLLLLLYGWAVVPLMYLLS
FFFSTAATAYTRLTIFNMISGTATFLAVTIMTIPELKLQDLSHLLDKVFLIFPNYCLGMS
FSQFYQNYEFISFCTSSPLSRTICKILNITYQENYFSMSEPGVGRFLVAFSVQGVVFIIL
LFVIELQCVRTLWRLLTSLCRGRKQLPLIEDAALLPEDRDVAEERKRVLECQPIVESMVG
SPLILQELSKVYSSGTNLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESVTSG
DAYIDGYSILRDIKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVSGCVENV
LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVT
RTRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVHVE
AELEDSDLQLFKDFIESTFPGSQLKDEHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYRIE
DYCVSQISLEQVFLSFAQFQHCTESGRK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggctatcatgagacaatttggactactggtgtggaaaaactatcttcagcagaaacgt
caaatcctggtaactctggtggagatactcctgcccctgctcttctctggcatcctcatc
gtgctgcgtcagaaggtgccttttaaggactacccaaatgccactatctatgagagctac
gctgtcgacacgctacccaagaggttcttgcaacacttacagctggcctatgtgcctggt
aactccagtgtggtgcgccaggtggcagaggatgtgcgaggcagcctgttcctctcctca
gtgcgtggctttgaaacagaggagcagtttgaggaatacgtgagaaatgatcctctgtca
ggaaagctgctggctgctgtggtgtttgagcaccctttcagccatgatgatgaacctctg
cctctaagggtgagctaccacctgcgcttctccttcaccccacgcaacgccccacccaag
gaaaagtcggagctgaacccaaacagtgacctggactggcacacgctcagcttatttcca
ctttttcaactgccagggccgagagagcagtatgacaaggaaggaggcacgccaggttat
ttccgagagggctttctggcggtgcagcacgcagtggaccgagccatcatgcgctcttac
aacagaactgccgctgcgcctctgctgcgacagatcagagtggtcctgtcacggtttccg
taccctgccttcatatatgacgtcttcatcctggccattcagaaccaactgcctctagta
ctggtgctcagcttcacttacacctccctcaatatagtgcgagccgtggtgcaggaaaag
gaaaggaagctgaaggagtacatgaggatgatgggtctcagcaactggctccactggagc
gcctggttcctcatgttcttccttttcctctccatttctgtcttttttgttactgtgctg
ctttgtatccaggtgagccctaatggagcagtgctgacctacagtgaccccacgctggtc
tttgtcttcctgctcgtcttcactgtggccaccatcaacttcagcttcatgatcagtgcc
ttcttctcacgagccaatgtggcagcagcagcgggcggcttcatttatttcatgagctac
ctgccttatttgttcctgtggccacgctacgacttattgagccatgcccagaaggtgtca
gcctgccttatctccaacgtggccatggccatgggtgctcagctcataggaatgtttgaa
ggcaaaggtacaggaatacagtggtgtaacctgtttgactccgtgacggtggatgatgac
ttctccctggcccaggttcttggcctgctgctgtttgactctgtgctttacgggctggtg
gcctggtacatggaggcagtttttcccggggagtacggagtgcctctaccatcctacttc
ttcgtactgccttcatactggtgcagcagccctcgcatggctttagtgaatgagaaggag
gaagaggaggatgcagaaaaggctctgaaaggagagtttattgaggaggaacctgccgga
ctagtctccgggatcaagattaaacaccttgttaaggaattcaaagttggccacaagaca
cgcaaagcagtgcgggatcttactctgaacatgtttgaaggacagatcacagtgcttcta
ggacacaatggtgctgggaagaccacaacgctgtccatgctgacaggtcttttccctccc
actagcggcagggcctatatcaatggttatgacatctgtcaggacatggctctgatccgt
cgcagtctgggactctgtccgcagcacgacgtactgtttgataaccttacagtcagagag
cacttgctcttctatgcacagttgaaaggctactccaaagacaagattccagatgaggtg
gacagaatcatccgtatcttgaaccttgaggacaagcggcaggctcgctccaagaccctc
tccggtggcatgaagagaaaactctctattggcattgccctcataggagactccaaggtt
gtaatgttagatgagcccacgtcaggtatggacccttcagctcgacgggccacctgggac
cttctgcaaggggagaaacgtggtcgcaccattctgctcaccacgcactttatggacgag
gcagacctactcggtgaccgtatcggcatcatggcaggaggagagctgcagtgctgtggg
tcgccactcttccttaaaaacaaatatggtgctggctaccacatggtgatagtaaaggat
gctctttgtaacgtgtctgagataacccgccttgtccacatgtatgttcctaatgccaca
atggagagcagtgccggggctgagctctcttacattttgcccaaagaaagcaccagcagg
tttgagctgctgtttgctgagctggagatgaacagagaggaactgggcatcgccagctat
ggagcttctgtaaccaccatggaagaggttttcctcagagtgggaaagttggtggattct
agtttggacatccaggctatccagctgcccgccctgcagtaccaacatgagagacgctct
catgactggaccacagatgacgccagcagcatcagcggcatgactgatgtcacagacttc
accgacagtggcaccctcatctcagaggactgctctaacatcaaactgaacacgggggtc
agactgcacctgcagcagttctatgccatgttcctgaagagggcattgtacagctggagg
aactggaaggtaatggtggctcagttcctggttcctttggtcttcactgtggtggcctta
gttgtggcacgcacctttcccaatcaccgggatgctactcagctgaggctggcactcagt
cgctatggccccaccagagtccctttggctctgcagcccggggcaggtcccctggcctct
gccttggcgaaagcatacagttctcagctccctgcccagctaggccaactcgtcaacatc
actgactttactgattacatcctcacccaggcggaggaagagggcggcagctttaatgag
cgctgtgtggtgggtgctgctttccgtggcagcagcagcctgtatgctgaggcaacagcc
tacttcaacaacgagggctaccatacacctgccacagcactcatgatggtggacaacgca
ctgttcaaactcctagcagggccgaatgcttccatccagacgggcaattaccctatgcca
cgtaacatgtctgagatcgcgcagagccagctcacagagggtaagacaggttttgccatc
gccatcaacctgatgtatggtatggcctccctgtccagcaccttcgccctgctgctcgtt
acggagtcctctattaagtccaagcatgtgcagcaggtcagcggagtctacctttcaaac
ttttggttttcagccctgctctgggaccttgtcaacttcctgctgccctgtctcctcatg
ctggtggtattccaggcgtttggagtcaaggctttcgtagaggataaccacctggtagat
gtgctgctgttactgctgctctatggctgggctgttgtgcctcttatgtacctgctcagc
tttttcttctccactgctgctactgcctacactcgcctcaccatctttaacatgatctct
ggcacggccacatttctggctgtcaccatcatgaccatcccagagttgaaactgcaggac
ctatcgcacttactggacaaggtgttcctgatctttccaaactactgccttggcatgtcc
ttcagccagttctaccagaactacgaattcatctcattttgtacctccagtcccctcagc
cgaacaatctgcaaaattttaaacatcacataccaggaaaactacttctcaatgtcggag
cctggtgtgggacgctttcttgtggccttttcagttcagggagtggtcttcattattcta
ctgtttgttatcgagctgcagtgtgtccgcactctctggcgactcctcacatctctgtgc
agaggacgcaaacagttacctctaatagaggatgcagcgctccttccagaggaccgagac
gtggccgaagagaggaagagggtcctggagtgccagccaatagtggagtctatggtcggt
agccccctcatactgcaggagctcagcaaggtgtacagcagtgggacaaatcttttggct
gtggacaggttgtctctagctgtgggaaaaggagagtgttttggcctcctgggcttcaat
ggagcagggaagacgacaacctttaagatgctgacaggtgacgagagcgttacctctggg
gatgcttacattgatggatacagcatcttgagggacattaagaaggtgcagcagcgcatt
ggttactgtccccagtttgacgccgtattggaccacatgacaggaagagaaactctgagt
atgtatgccaggctcagaggaataccagagaagtatgtgtccggctgcgttgagaacgtt
ctgcggtcgctgctgctggagcctcatgccgataaactggtccgcagctacagtggtggt
aacaagcggaagctgagcgctggcatggctctgattggtgggcctccggtcatcttcctg
gatgaaccttcaactgggatggaccctgtggccaggaggctgctctgggatgctgttaca
cgcacaagggaatctggcaaggccataatcatcacttctcacagtatggaggagtgtgag
gccctgtgcaccaggctggcagtgatggtcaatggtcagttcaaatgcctcgggagtccc
cagcacctgaagagcaagtttggcagtggctacaccctgctggctaaagtgcacgtagag
gctgagttggaggacagtgacctgcagctatttaaagactttatcgaaagcacttttcca
ggaagtcagctaaaggatgaacaccagggaatggtgcactatcatttgactgacaaaaca
ctgacctgggcccaggtgtttggtactttggaggcagccaaagagaaataccgcattgaa
gactactgcgtgagccagatatcgctggagcaggtgttcctcagctttgcccagttccag
cactgcacagagagcgggaggaaataa
DBGET
integrated database retrieval system
