Lates calcarifer (barramundi perch): 108886212
Help
Entry
108886212 CDS
T04895
Name
(RefSeq) golgin subfamily B member 1 isoform X1
KO
K20478
golgin subfamily B member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108886212
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
108886212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
Motif
Other DBs
NCBI-GeneID:
108886212
NCBI-ProteinID:
XP_018536469
UniProt:
A0A4W6C576
LinkDB
All DBs
Position
LG18:complement(8862755..8881611)
Genome browser
AA seq
2981 aa
AA seq
DB search
MLSRLATVLQELSGEEGQDGDPQGVLVPQLPAGEGQASAESEVPEEAMERLAHLEQLVVQ
LKELIRDKDTQLVQKDTELANKDAQLKNEKEEAEARFTKLKLQAKAKMASLNKQITDLKG
SGGGTQSPDSSFTGAGAAVEEELQELKNKLSEEEANSRELKQRLQATEQLLQEKESAHTE
QLQKLQAVVCEKDVRFQEQIQKHEEELMRVTTQSQNDGELQQALLAAQRRCEELEEALKS
RSQVLEMLQQEVSSADQQKQILTAQFRQMEQELAEAVKLREEERQQWSEQASRADVELAA
LRSSLEALERERIEVVRQESSELVSLREAERVSQDALEKERMEVARMERELALMREAELA
AVQASCDASERDRAEIARLESELASMREAAARSSQDALEREKSGVDKLERELASLKEEVQ
EEAQRKDEILAEVWRHLRAMAPGDVQAAEENPIPDDLSLLLDTVQSIENQLKRLKDERSE
SEERCAEITHAMETLQEQLDRKTTEQEAATVKIQQLEQHIVTLSERDVTEPPAQDSSEAE
KAHILELEQQLIEKDNELFALRESLRLAKDHSSGEVESSEPYDQTPDQDQGASVAPLDSS
AALPDLMEDTQEEETTLVAENTSILSISADNESSPELIGHQSESPEESKGTSSDEMVASS
DSEVAHSSWTLLEAVNQDGGQEWPSILQDFGQLQLQSWEATSMEQETSTVQVESSSVVIR
ETVQVHLTQHSSSSSDANVPSGQVFAQALAEELQKRYSELLSELQRLREAAAESQEKIRS
LEEETQSLTAAKEEAESQVSNFAEELKLARVELDQVSQQSSSVVEKHRVEMQLLEEQIDI
LNTESQAKEQKIHSLQSDLETIQRALSEQEGQARMLSAQLEDRELLSSELERRLQEMENS
MLEYSQTSDLNNESLSKKDSEISELQLRLSQKENEMMELNDSMSAKLLQVEEEKFQIDRE
VHKLKEQVVELEKVRDEKQQVSPEDSPARVDDELGRVQKEKEALETQLTNTRKKLQAALV
HRKELMKKVADFEAEAKKEQDELTKGETPADTPEVEKTRGHEIQEMEAKLLELEQALRSK
EETVETLEQKISEQDQVIAETLALNRKLSEEAENTQQAPDISPETTVLQSQVATLEAECE
TLQKKVQEAQESRKETIRKAKEKDRHHREQLKQQKEEYSELMDRFEVQSGEREVLLTKLR
ELEEKVSAEGQDLPQQEIEERAENVEKQAAGDWVQEDWVDFASSETDSSQPQTSDPVQHP
AEPSGVHPAQMEESLKALREEIQTVQVANTELQKQLQEAQASLSLKGAEVDDLGKELQAL
RQKERQIDALSEEINDLREKHRQAESYAETLKAEMEAAAKATSAESTSSIENLQAEVNDF
KQFLNNKNHEIMELSQQLSEQNSLIHLMQDTVSQKDQLIASLQEELKVEKEKTQRLEVEV
PQKQEEEKDSEAKIQQLQRKLQAALISRKEALKENKTQKELLASTEKLTTELQQKIETAE
DELEKLRAERVRLIEEVDRTLLENQSLGSSCESLKLAMEGILNEKDACKREVEFAKEEAA
RVSREWEEKVQSMKDEYETLLKSYENVSDEAERVRRVLEAARQERQELAAKVRTHEAARQ
EAERQAEEAQKEVDSVKDKMRKFAKTKQQKILELEEENEKLREMQEKPVIKREDKSLKAE
VQRLEEEMEALKAQLDTTAAERDSLGQQIEELREQLAQMGEKENEIQVTPLSSAAVIEEV
VTAQKSDIIMTRAEPVESQNEDNGRALTPKETPGEQIVAVSAPETHLQPDEEKEEMTESA
QTLLEDKMKEMEAAVKTERGLWQEREAELRAELTSLERDLQESKEKLGLVASLEKCLQES
KERENSLIEEASKRETQFKELLRSLETEKDNLEERLMNQLAQLNGSIAGYQQEAADNREH
LAELQREVERLERERAELEAEAQSEKDRASRLEEDMRQAQRERAEAEAESGKQRELEQQL
RSAQRVKEGSQSRARQLEELLREKQLEVRQLQKDSIQYQERISELGREAKALQLGHDELS
NKLEQSQLETSKTLEDLKKTEAELASCKSQLDDVQKQLSEALAEKTTLEQSAQQKEALMK
AEAEQTLDSVRFRLGAELKEMELRLEEAYREREREEEATLEAREVAEGAERQAQEMQARL
DESLARLAAFSRCMSSLQDDRDRVLDEARQWETRFNDALQGKEAEVREAETRAKELAEQL
QKETALKEERQLSVDRLEKADKEWQLRLEEEEKKVAESQAVLSEERSKLQQTTDELQSAQ
NEVSTLTDEVEGLCHRVQALEEAVGRLQGEVNQARTELREREAEERRLCLNVEQLETDLR
SSKALTESLQAELHEKERREVEMLGEREQAVAQAADEARKEADSRAQEAEEELEQRRGEV
RDLEEKLRKAEEESNNRKAKLDSFMKAMGSLQDDRDRVLNMYKQLEEKHLQVMMEKDALI
QEAAGENNSLKEELRSLLVQRDDLYAEKAKLSAQLHGYRDELNQVLSMKDSQHKQLLAAQ
RERITTLEKEREELESQLKSISRARETEIEAARVERETLVQAADSMTVSQVIDAPGAEVE
KLREQLQAAREQVEALEESLLRERQEWDSKSKELAELRWEGGVMRTESESAQERVAELAR
DLLAIEQKLLEEKEVTTQLRAENQSFAKAMASLQDSREEAVNKAQELSLKLEEMSKAGGH
AAHSSPGGSTGEVWGLKNALQALQNDRERLLEQLQTQASELERQKSELARLGAGELIKVS
QELFEEKKNNKDMLGVVTQLENVVEVSKQEIETLRLERIDWMAQAEQLKQQTLATLSERD
QQLRQLHAMLEEARSHKPKLQQEQYQREGTEKADSPPGAPQERSSLLDSHTYIAEVKELQ
RRLDEETQQRMAAEEQLMATQDRLKRHSQAKWHSAQEEDHSETAVFIEPPEGAVTRTRRG
GPGLMRMLRVAFCSRQRTPLLFSLYLLTVHVLLLLCLGGYL
NT seq
8946 nt
NT seq
+upstream
nt +downstream
nt
atgttgagccgcctggccacggtcctccaggagctctctggagaggagggccaagatgga
gacccacagggtgtgcttgtgcctcagctccctgctggtgagggccaggcttcagcagag
tctgaggtcccagaggaggccatggagaggctggctcatctggaacagctggtggtccag
ctgaaggagctcatccgggacaaagacacccagcttgtccaaaaggacactgagctcgca
aacaaagatgcacagctcaagaatgaaaaggaagaagctgaggctcgattcaccaaactc
aaactgcaggccaaagctaagatggcttcactcaacaaacagataactgatttgaaagga
tcaggaggaggcacacagagcccagacagctctttcacaggagcgggcgctgcagtggag
gaggagctccaagaactgaagaacaagctgagcgaggaggaggccaacagcagggagctt
aaacaacgactccaggccaccgaacagcttcttcaagagaaggaatctgcccacactgag
cagttgcagaaactgcaggctgtggtctgtgagaaggatgtgcgtttccaggaacagatt
caaaaacacgaagaggagttgatgagggtcacaacgcagtctcagaatgatggcgagctt
cagcaggccctgcttgcagctcagaggcgttgtgaagagcttgaggaggccttgaagtct
cgctcccaagtgctggaaatgctgcagcaggaagtgagcagtgctgatcagcaaaaacag
attttgactgctcagttccggcagatggagcaggagctggccgaggccgtgaagctgagg
gaggaggagaggcagcagtggtctgaacaggccagcagggccgatgtagaactcgcagcc
ctccgaagcagcctggaggctctggaaagagagagaattgaggtggtaaggcaggagagc
agcgagctggtctccctgagagaggctgagcgtgttagtcaagacgctctggagaaagag
aggatggaagttgccagaatggagagagaactggctctgatgagagaggctgagctcgca
gccgtccaagcgagctgcgatgcgtcagagagagacagggcagaaatagcccggcttgaa
agcgaacttgcatcaatgagagaggcagccgctcgctccagccaggacgccttagagagg
gagaagtcaggagttgataaactagagagagagctggcttcacttaaagaggaagtccag
gaagaagcccagaggaaggatgagatcttggctgaagtttggagacatttacgagctatg
gctccaggtgatgtacaagcagcagaggaaaaccccatccctgatgacctctccctgctc
ctggacactgtgcagtcaattgagaaccaactgaagcggctgaaagacgaacgaagtgag
agtgaggaacgctgtgcagagatcacccacgccatggaaacccttcaggagcaacttgac
agaaaaaccacagaacaggaggcggcgactgtgaagatacagcagctggagcagcacatt
gtaacgttatctgagagagatgtgactgaaccaccagcacaggattcatctgaggcagaa
aaagcacacatactggaactggagcagcagctaatagaaaaagacaatgagctgtttgcc
ttgcgagaatctctcagactggctaaagaccacagctctggtgaggttgaatcaagtgaa
ccatatgatcagaccccagaccaggatcagggtgccagtgtggctccccttgacagctct
gcggctcttcctgacctaatggaggatacacaagaagaagagaccactttggtggctgag
aacacctccatcctctccatttctgctgataatgaaagtagcccagagcttattggtcac
cagtcagagtccccagaagagtccaaagggacttcctcagatgagatggttgccagtagt
gattcagaggtggcacacagcagctggaccctcttggaagctgtgaatcaagatggaggg
caggagtggccctccatcctgcaggactttggccagctacagctgcagtcgtgggaggcg
acaagcatggagcaggaaacctccacagttcaagtggagtcctcctccgtcgtcatccga
gagacagttcaggttcatctaactcagcacagttcttcttcctcagatgctaatgtgccg
tctggccaggtctttgctcaggccttagcagaggaactccagaagaggtacagtgaactg
ttgtcggagctgcagaggctcagagaggcagctgcagagtcacaagagaaaatcaggagt
ctggaagaagaaacacagtccctcactgctgccaaagaagaagcagagtcccaggtcagt
aactttgcagaggagctaaagttagccagggtggagttggaccaggtttcccagcaaagt
agctctgtggtggagaagcaccgcgttgaaatgcagcttctagaggagcagatagacatt
ttgaacactgagagccaagccaaggagcagaagattcatagcctgcagagcgacttggaa
acaatccagcgagcgctctctgagcaggagggtcaggccaggatgctgagcgctcagcta
gaagacagagaactcctctcctctgagcttgaaaggaggcttcaagaaatggaaaacagc
atgttggaatattcccagacctcagatctcaacaacgagtctttgtcaaagaaggactct
gagatcagtgagctgcagcttcgtctcagccagaaagagaatgagatgatggagctcaac
gacagcatgtccgctaaactcctacaagtagaggaggagaagttccagatagacagagaa
gtccataaactgaaagagcaggtagtggaacttgagaaagtgagagatgagaaacagcag
gtgagtcctgaggactcgccggctcgtgtagatgatgaacttggtcgtgttcaaaaggag
aaagaagctctggaaacccaattaacaaacacaaggaagaagcttcaggctgcacttgtg
catcgcaaagagctgatgaagaaggttgctgattttgaggccgaagctaaaaaagagcaa
gatgaattaacaaagggtgaaactcctgcagatactccagaggtagaaaaaactagagga
catgagattcaagaaatggaagctaaactcctggagctcgagcaagctttaagatccaaa
gaggagacagttgaaactcttgagcaaaaaattagtgaacaggatcaagtcatcgctgag
acgcttgccctgaatagaaagctaagcgaagaagctgagaacactcagcaggcaccagac
atttctcctgaaacaaccgtgttacaatcccaggtggccactctggaagcagagtgtgaa
acgcttcagaagaaggttcaggaggctcaagaatctcgcaaagaaaccatccgcaaagcg
aaagagaaagacagacaccaccgagaacaactgaagcagcagaaagaagaatacagtgag
ctgatggatcgttttgaggtgcagagtggagagagagaggtccttctcactaaactgaga
gaattggaagaaaaggtgagcgctgagggacaggacctgcctcaacaagagatcgaagaa
cgggctgaaaatgtggagaagcaagcagcaggtgactgggttcaggaggactgggtggat
tttgcctcatctgagactgattcatcacaaccacaaactagcgatccagttcagcatcct
gcagagccgtctggtgtccaccctgcacaaatggaggaatctctgaaagctctcagagaa
gagatccagactgtgcaggtggcaaacacagagttacagaagcagctgcaggaagctcag
gccagtctgtcactgaagggggctgaagtagacgatttgggcaaagagctgcaagcgcta
agacaaaaggagagacagattgacgcactctcagaggaaattaatgatcttagagaaaag
catcgccaggctgagtcttatgcagaaaccctaaaagcagagatggaagctgcagccaaa
gcaacatctgcagaatccacatcctccattgaaaatctacaggctgaagtcaacgatttc
aagcagtttctcaacaacaaaaaccatgagataatggagcttagtcagcagttaagtgag
cagaactctctcatacacttaatgcaggatacagtgtctcagaaggatcaactaatagct
tctttacaggaagaattaaaggttgagaaggaaaaaacccagaggctggaggttgaggtt
ccacaaaagcaagaggaagagaaagacagtgaggcaaagattcagcagctacagagaaaa
ctgcaggccgctctgatctctcgcaaagaggccctcaaagaaaacaagacccagaaggag
ctgctagcctcaaccgagaagcttactactgagctgcagcagaaaatagagacagcagag
gacgagctggagaagctaagagcagaaagagtcagactcatcgaggaggttgatcgaact
ttactggagaaccaaagccttggatcatcctgcgagagcctcaaactggccatggaagga
atactgaatgagaaagatgcctgtaagagagaggtggagtttgcaaaagaagaggctgcc
agggtgagcagagagtgggaggaaaaggttcaaagcatgaaggacgagtacgagactttg
ctcaaatcctatgaaaatgtgagcgacgaggcagagagagtgaggcgggtcctggaagcc
gccaggcaggagagacaggagttggcggccaaagtgaggacgcatgaggctgcgaggcaa
gaagctgagaggcaggcagaggaggcacagaaagaggtggattcagtgaaagacaaaatg
agaaaatttgccaaaacgaagcagcagaaaatcctggagttagaggaggagaatgagaaa
ctgagagagatgcaggaaaagcctgtaatcaaacgagaggacaagtctctgaaagctgag
gttcaaagacttgaggaagagatggaggctttgaaagcccagctggacaccacagcggca
gagagagactctttgggacagcagattgaagaactgagggaacaacttgcccaaatggga
gagaaagagaatgaaattcaagtgactccacttagctctgcagctgttatagaggaggtt
gtcactgctcagaaatcagacataatcatgaccagagcagagcctgttgagagtcagaat
gaagacaatggaagagccctaactccaaaagagactccaggtgaacaaatagttgcagtg
tctgcaccagaaacacatttgcagcctgatgaggaaaaagaagaaatgactgaaagtgct
caaactttattagaggataaaatgaaggaaatggaggcagctgttaaaacagagaggggg
ctgtggcaggaacgagaggctgaactcagagctgaactgacctctcttgagcgagacctg
caggaaagcaaagagaagctgggacttgtggcctctttagagaagtgcctgcaagagagc
aaagagagagagaacagcctgattgaagaggcttcaaagagggaaactcagttcaaagag
ctcctcagaagtctggaaactgagaaagataacctggaggagcgcctgatgaatcagctg
gcccaacttaatgggagcatcgccggttatcagcaagaggcagcagacaaccgggagcac
ctggctgaacttcagcgtgaggtggagaggttggagagggagcgagctgaactggaagcc
gaagctcagagcgagaaggaccgggcgtccagactggaggaggacatgaggcaagcccag
agagagagagccgaagccgaagcggagtcgggcaagcagagggagctggagcaacagctg
aggtcggctcagagggtcaaagagggcagccagagcagagcacgtcagctggaagaactg
ctgagggagaagcagctggaggtccgacagctgcagaaagacagcatccagtaccaggag
aggatcagtgagctggggagggaagctaaggcgctgcagctaggacacgatgagctcagc
aacaaactagagcaatcccagctggagacttccaaaactctagaggacctgaaaaagact
gaggcagagttggctagctgtaaatctcaactggatgatgtccaaaaacagttaagcgag
gccttagctgagaaaacaactttagaacagagcgcccagcagaaagaggccttgatgaaa
gccgaggcagagcaaaccctggactcagtgagattcaggctgggagctgaactgaaggag
atggagctgagactggaggaggcctacagagaacgggaaagggaggaggaagccaccctg
gaggccagagaggtggcagagggagctgagagacaggcccaggagatgcaagctcgtcta
gatgagtctctggccaggttggctgccttctcacgctgcatgtcctctctgcaagatgac
cgggacagagttttggacgaggcccggcagtgggagactcgctttaatgatgctctacag
ggtaaggaggctgaagtccgggaggcagagacacgggccaaggaactggcagaacagctt
cagaaagaaactgcactgaaagaggaacgtcagctttctgtggacagactagagaaagca
gacaaagagtggcagctgagactggaggaagaggaaaagaaagttgcagagagtcaagct
gtcctcagtgaggagaggagcaagcttcagcaaaccacagatgagctgcagtctgcacaa
aatgaagtcagcacactgacagatgaagtggagggtctctgtcacagagtccaggccctg
gaggaggctgtaggtcggctgcagggtgaagtcaaccaggccaggactgagctcagggag
agggaggcagaagagaggcggctgtgtctgaacgtggagcagctggagacagacctgagg
tcctctaaggccttgacagagagtctgcaagcagagttacatgagaaggagaggagagag
gtggaaatgctcggggagagggagcaagctgttgctcaggctgccgacgaggctagaaag
gaggccgacagccgggcacaagaagctgaggaggagctggagcagagaagaggagaagta
cgggatctggaagaaaagctgcgaaaggcagaggaagagagcaacaaccgaaaagccaaa
ctggactctttcatgaaggccatgggctccctgcaggatgacagagacagagtccttaac
atgtacaaacagctggaggagaaacacctacaggtgatgatggagaaggatgctctgatc
caagaggcagcaggggagaacaacagcctgaaggaggagctgcgctctctgctggtccag
agagacgacctgtatgctgaaaaggccaagctatccgctcagcttcacggctatcgtgat
gaacttaaccaagtcctgagcatgaaggactcccagcacaaacagcttctggcagctcag
agagagcggatcaccacactggaaaaggaacgtgaggaattggaaagtcagttgaagagt
attagcagagccagggagacagaaatagaggcagcgagggtggagagggagactcttgtt
caggctgctgacagcatgacagtatcacaggtgatagatgcccctggtgccgaggttgag
aagctgagggagcagctgcaagcagcaagagagcaagtggaggctttagaggagagccta
ttaagggagagacaagagtgggacagcaagagcaaagagctggctgagctgcgatgggag
ggaggtgtgatgcgaacagagtctgagagcgctcaggagagggtggcagagctggccaga
gacctgctggccatcgagcagaagctgctagaggagaaagaagtgacgacgcaattgaga
gcagagaaccagtcgtttgccaaagccatggcctcactccaggacagcagggaggaggca
gtaaacaaggcccaggaactgagtctgaagctggaagagatgagcaaggcaggtggtcac
gcagcacacagcagcccaggaggctccactggggaagtgtggggtctgaagaatgcacta
caagcccttcaaaatgacagggagagactgctggagcagcttcaaacacaagcatctgaa
ctcgagaggcagaaatcggagctggctcggctgggagcaggagagctcattaaagtcagc
caggagctgtttgaggagaagaagaacaacaaggacatgctgggtgtcgtgacgcagctg
gagaatgtggtggaagtgagcaaacaggaaatagagacgctcaggctggagcgtatcgac
tggatggctcaagcagagcagctgaagcagcagaccctcgccacactttcagagagggac
caacaactgcgacagctccacgccatgctggaggaggctcgttctcataagcccaaactt
cagcaggaacaatatcagagagagggcacagagaaagcagacagtcctcctggagcccca
caggagcgaagcagtctgctggacagccacacatacatagctgaggtcaaagagttgcag
cggaggttggatgaagagacacagcagaggatggctgctgaggagcagctaatggccaca
caggacagactcaaacgtcacagccaggctaagtggcactctgcacaagaagaggatcac
tcagagactgctgtttttatcgagccgccggaaggagctgtcactcgaactcggagaggc
ggcccaggtttgatgaggatgctccgagtggccttctgctctcgccagcgcacccctctg
ctgttcagcctctatctgctcactgtgcacgtcctgctgctgctgtgcctgggcggatac
ctctga
DBGET
integrated database retrieval system
