Lates calcarifer (barramundi perch): 108886216
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Entry
108886216 CDS
T04895
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108886216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108886216
Enzymes [BR:
lcf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
108886216
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
108886216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
108886216
NCBI-ProteinID:
XP_018536478
UniProt:
A0AAJ7V534
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All DBs
Position
LG10:11736080..11738540
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AA seq
311 aa
AA seq
DB search
MPEGPELHLASLYVNKMCEGVVFTGPVKKSEVSKSPEVPFTCEAYCIRAASRGKEVKLTL
TPIKTDDTKQRVKAGQADQPMDIVFRFGMSGYFRFTAEDELPKHAHLRFYSKEKPCRVLS
YVDVRRFGSWQPNGTWQPDRGPCVMFEYKSFRENVVAHLSDRAFDRPICEVLLNQKYFNG
VGNYLRAEILFRLSIPPFMPARTVLEGLESEDTCENGKPVKNDITDTKTTDRTKKKGVKG
QTADLLRLCHTVPLEVVNLGGKGYDPAKADYSDFEAWLQCYCVDGMKSIRDHNGRTMWFK
GDPGPMAPKGI
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggaccggagctccacctggccagcctttacgtgaacaaaatgtgtgaggga
gtggtgttcactgggccggttaaaaaatctgaagtcagcaagagtcctgaggtgcccttc
acctgtgaggcctattgcatcagagctgcttccagggggaaggaagtgaagctcacattg
acgcccattaagactgatgacaccaaacagagagtgaaggcaggacaagctgatcagccc
atggacattgtttttcgctttgggatgtctggctatttccgcttcaccgcagaggatgag
ctgcccaaacatgcacatctgcgcttttattccaaagagaagccctgcagagtgctgagc
tatgtggatgtgcgcaggtttggcagctggcagcccaatgggacctggcaacctgaccga
ggtccctgcgtcatgtttgagtacaaaagcttcagggagaacgtggtggcgcacctgtct
gaccgcgcctttgacaggcccatctgtgaagttctgctcaatcagaagtatttcaatgga
gtcgggaactatctgagagctgaaatccttttcaggttgagcattccgcccttcatgcct
gccaggaccgtgttggaaggccttgagtcagaagacacatgtgaaaatggcaagcctgtg
aaaaatgacatcacagacacaaagaccacagacagaaccaaaaagaaaggagtgaaaggg
cagacggcagacctgcttaggctgtgtcataccgtacctctggaggtggtgaatctaggt
gggaagggttacgacccggcaaaggcggattactctgactttgaggcgtggctgcagtgt
tactgtgttgatgggatgaaatctatccgggaccacaatggcaggaccatgtggttcaaa
ggagatccaggccccatggcacctaaaggtatttaa
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