Lates calcarifer (barramundi perch): 108886236
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Entry
108886236 CDS
T04895
Symbol
mypn
Name
(RefSeq) myopalladin isoform X1
KO
K22028
myopalladin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108886236 (mypn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108886236 (mypn)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108886236 (mypn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
108886236
NCBI-ProteinID:
XP_018536488
UniProt:
A0AAJ7PR67
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All DBs
Position
LG16_LG22:complement(2125643..2142267)
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AA seq
1799 aa
AA seq
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MQENNLDQPPSLSQLLRESYLAEARAQQRHSEMSRSDASSTRLQIYGSLKGKAEDSVGHS
DPQFPDLSAFLSQEELDKSVNLARQAIGHEPHEERAEVKASVVPLTPSNISSVSVSSSTP
PSVPFANPSPAPFAAPSAAPFTQPTPEFKEQHTTFTSDRKMHKASTRQDNMVRNSRDSSD
GFNDFNRSARNAPYGLETQSKKEFLNKAADFIEELSSLFKANSSKRIRPRTCKAHRSRVQ
NKSQNEETVYPLGSENRERAVLPAEVEKERPSPAVSHQPEVRLDSGHGEFQDCRITEEQQ
RYDCASQEVEQEEAGSHALTEAPYPTEPVCEPPRFIQKLKSREVPEGSKVQLDCIVRGLP
VPEVRWFCEGKELENSPDIQIITNGELHSLIIAEAFEEDTGRYSCFASNFYGTDSTSAEI
YVEGASSSDSEGEQRFEHVAQLQRKTQTSAPTSPPSSGQTIPAEEEEFLSPQPTATTEEP
VEELSLPPTNQPLLLGQTTTTVLSVPELSKVSVASAAQPAQEESTALPVQAFPTLSQANT
ELSEAQEVSASVQVTSTPPVLQTATAIAPTQTPQPESQTSNLNYLQGLNGQPIMAAPVFT
KSLQDLFVSEGQLVVLECRVKGTPSPRVDWYREGKTIEDSPDFRILQKKPRTPAESEEIC
TLVIAEVFPEDSGVFTCTASNKYGTVSSTAALRVRGHGRNTNHVRPVNSLTTEPSRIQEP
SPSVPTVNPQPEVTVTNSIKPHSSTIRLDPLVSSTLRLDPLNTSTLRLDPHSSSMLRTSL
SSLEPSSLSSSSTSSSFNSRSTSTPNLDPLHLRHDPSGSSGAQSSGGVLSYPKPFMSPSV
VETSAEQEVSTPTMTSPDTSPKAKGTPNHQNGSPIVVPLPDPPPNSCLKSGTLTNHKDSR
SGRVGLRVHFKLPEDEEDEQSDASSRCEDEDAALALANKEPPPVLAKPKLDPAQLQLLHN
QVLLEQQQETEPPTQTHTTQPQSYTPIQIQILPEVRSSHEGLLWSPRMHREPQLLPFPPY
LSTTTPPQQAPHSAPPLTTTIAQPAPALNITFSPPLNTAPTPSFSSLPSTPQLKMSSLVT
SPPPAPQLSTTTVTQMNTIHASHLNLSPAALARSAPTLQFSSPPAPKLSTVPTDSTPALQ
QITSPAPLLRSTHASLMNLTATSYTFNYTRPKEFIAAQTFSPVRSPSPTESPVPLLQELA
AEINSSAASSPTLPPFSPPPRIFPTRVLKSPTSPPSLVSSPTPGTVQFLNNTFAIRAQSP
PQASSPTSSSSTPSPIQNPVAFLSSVLPSLTPSQPTNSMGLPRGAPLGLQKKVPKVRLPS
TEEIRESKETLLQDIEKKLRFKDDTPQFAHQQKLSNEGKTASRPLGPNIPATVINYDEEY
KVSNFEQRLMSEIEFRLERTPVEESDDEVQHDDVPSGKCIAPIFDKKLKNFRAMEGVPVT
FSCKVVGIPLPKVYWFKDGKQILRKNVHYKKIREGDGTCALHIESTTSDDDGNYTIMAAN
PQGRISCSGHLIVQTGPQRSRMTPIHSQRVRARIQEVESEQTQERFFRPHFLQAPGDMLA
HEGRLCRLDCKVSGLPNPELMWLVNGRPIYPDIYHKMLVRENGVHSLVIDPLTQNDGGTY
TCIASNKAGQSSFSLELKVVEKETKHPPQFLEKLQNMGIPEGTPVRLECRVVGMPPPVIF
WKKDNDTIPKTKDRISMTQDATGYVCLLIQPTTKDDAGWYTVSAKNEAGIVSCTCRLDIY
AQWHQSIPAPMKKAPRTGSRYAALTGQGLDIKSAFPTSDTSPILFSSSPPEAMLESEEL
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagaacaaccttgaccagccgccgtcgctgtctcagctcttaagagagagctac
ctggcagaggccagagcccagcagcgccacagcgagatgagccggtcggacgcttcctcc
acacgtctccagatctacgggtcgctcaaaggcaaagcagaggactctgtgggccacagt
gacccccagttcccagacctctcagccttcctgagccaggaggagctggataagagcgtg
aacctggctcgccaggccatcggacacgagcctcatgaggagagggcagaggtcaaggcc
tctgtcgtgccgttaaccccgtccaacatctcctcagtgtcggtttcttcctctacaccc
ccgtctgttcccttcgctaacccatctcctgctccgtttgctgcgccctccgccgccccc
ttcacccagccgactcctgaattcaaagagcaacacacaacgttcacgtcggacagaaag
atgcacaaagcctccacacggcaggacaacatggtgaggaacagcagggactccagcgac
ggattcaatgacttcaacaggtcagcgaggaacgccccgtacggtctggagacccagtcc
aagaaggagtttctcaacaaggcagcagacttcattgaggagctctcctccctcttcaaa
gccaacagctccaaacggatacgaccgagaacatgcaaagctcacaggagcagggtccag
aacaagagccagaacgaggagacagtttatcccctcggctcagagaacagggaacgcgca
gtcctgcctgcagaggtggagaaggagagacccagccctgctgtcagccaccaaccagag
gtccgactggactctggacacggggagtttcaggactgcaggattactgaggagcagcag
cggtacgactgcgcttcccaggaggtggagcaggaggaggctggaagccatgccctgaca
gaagctccatacccgacggagcctgtgtgcgagcctcctcgtttcatccagaaactgaaa
agcagggaggttccagagggaagcaaggtccagctagactgcatcgtcagaggactccct
gtgcccgaagtccggtggttttgtgagggcaaggagctggagaacagccccgacattcag
atcatcaccaacggagagctgcactccctgatcatcgcagaggcgttcgaggaggacacc
ggacgctactcctgcttcgcatctaatttctatggcactgactccacatcggccgagatc
tacgtcgaaggtgcttcctcttcagattctgaaggggagcaacgctttgaacatgtagcc
cagctgcagaggaaaacccaaacgtcagccccaacttcacctccatcatcaggccaaacc
atccctgcagaggaggaagagtttctgtcgccccaacccacagcaacaaccgaggaaccg
gtagaggagctgtccttaccaccaactaatcaacctcttctactgggccagacaaccacc
acagtactttccgtcccagagctctccaaagtatctgtggcatctgcagcacaacccgct
caggaggagtcgacagcgctgcccgtccaggcatttcccactttgtcacaggccaataca
gaactttcagaagcccaggaagtgtcggcatcagtccaggtcacatccacaccaccggta
ttgcagacagccacggcgatagcaccaacacaaacaccccaacctgagagccaaacctcc
aacctcaactacctacagggattaaacgggcaaccaatcatggctgcccctgtattcaca
aagagcctgcaagacctctttgtatcagaaggccagctggtggtgctagagtgccgtgtg
aaagggacaccatcacctcgggtggactggtacagagagggaaagaccatagaggactct
cctgacttcaggatcctgcagaaaaagccaagaactccggctgaatcagaggaaatatgt
actctggtcattgctgaggtctttccggaggattcgggggtgtttacttgcacagcgagc
aacaagtatgggaccgtgtccagcactgctgcactgagggtcagaggccatggcagaaac
accaaccacgtgaggcctgtcaacagtttgacgacggagccaagtcgaatccaagaacca
tccccatcagttcccactgtgaacccccaaccagaggttactgtgaccaacagcatcaag
ccccactccagcaccattcgcctagacccgcttgtctctagcaccttacgcctggacccc
ttaaacaccagcaccctccgcctggacccccacagctccagcatgttgcgcaccagcctg
tctagtctggagccatccagcctgagcagcagcagcaccagctcctccttcaactctcga
agcaccagcaccccaaacctagatcctctacacctgcgccatgacccttctggatccagt
ggagcacaaagcagtggaggggtgctctcatacccaaaacccttcatgtctccatctgtg
gttgagacgtcagctgagcaggaagtgtccacacctacgatgacgtcgccagacacgagc
cctaaagctaaagggaccccgaaccatcagaatgggagccccattgtggtgcccctccct
gaccctcctccaaactcctgcctcaagtccggcaccctgacaaaccacaaagactctcgc
tccggtcgtgtcggtctgcgcgtgcacttcaaactgcccgaggatgaggaggacgaacaa
agtgacgcatccagccggtgtgaagatgaagacgccgctctggcattggccaacaaagaa
ccaccacctgtgctggctaaacccaaactggacccagcccagctccagcttctgcacaac
caagtcctcttggagcagcagcaggagactgaacctccaacccaaacccacaccacccag
cctcagtcctacaccccaatccagatccagattctgcccgaggtccgaagctctcacgaa
ggtctgctgtggtcgcccagaatgcaccgtgaaccccaactgctgcctttcccgccctac
cttagcaccacgactccccctcagcaggcgccccactcggcgcctccactgaccaccacc
attgcccaacctgctccagcactcaacatcaccttttcacctcctctcaacactgctcct
actccttctttcagttccctgccttctacccctcagctaaagatgtcctcactcgtgacc
tcgcctccgcctgccccacaactcagcacaactacagtaacccagatgaacaccatccac
gcctcccacctcaacctgtcccctgcagctcttgccagatctgcacccaccctccagttc
tcctctccacccgcaccaaagctcagtacagtccccacagattcaactccggccttgcag
cagatcacctctcctgctcccctgctgagaagcacccacgcctccctcatgaacctcacc
gccacctcctacaccttcaactacacccggcctaaagagttcatagctgctcagacgttc
tcaccggtcaggagtccatccccgactgaatccccggtgcccctgctccaggagctggct
gcagagatcaactcttccgcggccagttctcccaccctcccgccattttccccaccaccc
aggatcttccccacgagggtgctgaagtctcccaccagccctccttcccttgtgtcctcg
cccacaccggggacagtgcagttcctgaacaacacattcgccatacgagcccagtcgcct
ccccaggcctcttctcccacctccagcagctccacccccagccccattcaaaaccctgtg
gccttcctcagctctgtcctcccgtccctgaccccgagtcagcccacaaactcaatgggc
ttgcccaggggagctcctttagggctacaaaagaaggtacccaaggtgcgcctcccgtca
actgaagaaattcgtgagagcaaagaaactctcctccaggacatcgagaaaaagctcaga
tttaaagacgacactccgcagtttgcacatcaacagaagctgagtaatgaggggaaaaca
gcgagcagaccccttggaccaaacattcctgctactgtcattaactatgatgaggagtac
aaagtgtccaattttgagcagaggctaatgagcgagatcgagttccgtttggagcgaacg
ccagtggaggagtcggacgacgaggtacagcacgacgacgtcccctctgggaaatgcatt
gcgcccatattcgacaagaaactgaagaacttcagggccatggagggtgtgcccgtcacc
ttctcatgtaaagttgtgggaatcccgcttccaaaggtttactggttcaaggatggaaag
cagatcttgaggaagaacgtccattacaagaagataagagagggggatgggacctgtgct
ttacacatagaatccacaaccagtgacgatgatggtaactacaccatcatggcagctaat
ccacagggacgaatcagctgctctggtcatttgatagtccagacgggacctcagcgaagc
cgaatgacacctattcactctcagagggtgcgagcccgcatacaggaagttgaaagtgag
caaacccaggagcgctttttccggcctcacttcctccaggctccgggcgacatgctggct
cacgagggaagactgtgcagattagactgtaaggtgagtggattgcccaacccagagctg
atgtggctggtcaacgggaggccaatctatccggacatttaccacaagatgttggtgcgg
gagaacggcgtccattccctggtcatcgaccctctgacgcagaatgacggcggcacgtac
acctgcatcgcaagcaacaaagcaggacagagctcctttagtctagaactgaaggtcgtg
gaaaaagagacgaagcatcctcctcagtttttggagaagctgcagaacatgggaattcct
gaaggaactccagtccggctggagtgtcgggtggtgggtatgcctccgccggtcatcttc
tggaagaaagacaatgacaccattcctaaaactaaggacagaatcagcatgacccaggat
gccacaggatacgtgtgtctcctcatccagccaacaacaaaagatgatgctggctggtac
acagtgtcagccaaaaatgaggctggaattgtgtcctgcacctgcaggcttgatatctat
gcacagtggcatcagagcatccctgcacccatgaagaaagctccgcgcacgggcagccgc
tacgccgctctgactggccaggggctcgacatcaagtcggctttccccacatcagacacc
agccccatcctgttctccagctcccctcctgaggccatgctggagagtgaggagctgtga
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integrated database retrieval system
