Lates calcarifer (barramundi perch): 108886256
Help
Entry
108886256 CDS
T04895
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108886256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108886256
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
108886256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108886256
NCBI-ProteinID:
XP_018536511
UniProt:
A0A4W6CZI0
LinkDB
All DBs
Position
LG16_LG22:1992829..1999121
Genome browser
AA seq
322 aa
AA seq
DB search
MPLRVVMQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAQANLCIGDMILAIDGEPTENM
THLEAQNKIKGCVEEMVLSIDRSETKLWSPLSSEEGKTHPYKMNLASEPREVKHIGSTHN
RSALPFTGFGSKVVTNQYNNPSGLYSSENIKDFNSAVDEVKTMATANEPNNKAPSDPSKT
AKRPPVAADSEVYKMLQENQESDEPPRQSASFKVLQEILETGDCDKPSGFRSVKAPTTKI
GSSVGNAEKLPICDKCGSGIVGMVVKLRDKFRHPECYTCTDCDVNLKQKGHFFVEDQIYC
ETHARERVTPPEGYDVVTVFPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgggtggtcatgcagggtcccggaccctgggggttccggctggtcggggga
aaggacttcgagcagccgctggcgatttcccgggtcacccccgggagcaaagcggcccag
gccaacctgtgcatcggagacatgatcctggccatcgacggcgagccgacggagaacatg
actcacttggaggcgcagaacaagatcaagggctgcgtggaggagatggtgctctccata
gacaggtcagagactaaactgtggtcgccgctctcatcggaggaagggaagacgcatccg
tacaagatgaatcttgcatcagagccacgggaggtgaaacacatcggctcgacccacaac
aggagcgctctgcccttcaccggcttcggctccaaagtcgtcaccaaccagtacaacaac
ccgtccggtctctactcctcagagaacatcaaggacttcaactcggctgtggacgaggtc
aagaccatggctacggccaacgagcccaacaacaaagctccatcagatccgtcaaagacg
gccaagcggccgccggtggctgcagattcagaggtctacaagatgctgcaggagaaccag
gagtccgacgagcctcctcgacagtcggcttcgttcaaggtgctgcaggagatccttgag
accggcgactgtgataaaccgtcagggttcaggagcgtgaaagcgcccacgacaaagatc
ggatcgtcggtggggaacgcggagaagttacccatctgtgacaaatgtggatctgggatt
gtggggatggtggtgaagctgagggacaagttccgtcaccctgagtgctacacctgcaca
gactgcgacgtcaacttaaaacagaagggacatttctttgtggaggaccagatttactgt
gagacgcacgcacgggagcgggtgactccgcccgagggctacgacgtggtcaccgtcttc
cccaagtag
DBGET
integrated database retrieval system
