Lates calcarifer (barramundi perch): 108886277
Help
Entry
108886277 CDS
T04895
Name
(RefSeq) DNA-binding protein Ikaros isoform X1
KO
K09220
IKAROS family zinc finger protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108886277
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108886277
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108886277
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108886277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
zf-C2H2_11
CPSF100_C
DUF6487
zf-C2H2_REST
GAGA
Motif
Other DBs
NCBI-GeneID:
108886277
NCBI-ProteinID:
XP_018536540
UniProt:
A0A4W6D276
LinkDB
All DBs
Position
LG16_LG22:complement(1609729..1626569)
Genome browser
AA seq
638 aa
AA seq
DB search
MVHSPRAPHPISCMAASNGLLGVSFYWHGTKQVPRARWLDSPLPQTRPVDKSEQNASAEL
RDIVMLGWNEEVQWRGEGLRAQLHGAAAALRPSAHGAGESWKNFILQTQGIAEYLHRMET
EEAQEMAQMPGRDSPPANEASEEAEEPMAVPEDLSANSAHQQNNNRGDKACNIKVEARSD
EENGLACDMNGVEEEECAEDLRVIDASGAKVNGSQPSPEAKAFSSAGGIRLPNGKLKCDI
CGIVCIGPNVLMVHKRSHTGERPFQCSQCGASFTQKGNLLRHIKLHSGEKPFKCHLCSYA
CRRRDALTGHLRTHSVGKPHKCAYCGRSYKQRSSLEEHKERCHNYLQCMGLQNSIYTVVK
EESNQNEQREDLSQTGSDRALVLDRLANNVAKRKSTMPQKFVGDKRLSDLSYDGGAGELI
QPHVIDQAINSAISYLGAESLRPLVQTSPASSSDVALGSMYPLHKQAQEGHAGSGHGLSA
KDSAAENLLLLSNSKSASSEKDGSPSHSGQDSTDTESNNEERPGGAAPGLIYLTNHITSG
VRNGVLPLVKEEQQRQYEAIRASMEMASEGFKVVAADGEQVRAYRCEHCRVLFLDHVMYT
IHMGCHGFRDPFECNLCGHRSQDRYEFSSHITRGEHRF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggtccactctcctcgcgcgcctcatcccatctcatgcatggctgccagtaatggtcta
ctgggtgtcagcttttattggcacggcacaaagcaagtgccaagggctcggtggctcgac
tccccactgccgcagactcggcccgtggataaaagcgagcaaaatgcctcagccgagctc
agagacatagtcatgttgggctggaacgaggaagtgcagtggagaggggagggactcagg
gcgcagctccatggggccgccgcggcgctgcgaccttctgcacatggagccggggagagt
tggaagaacttcatactgcaaactcaaggaatagcagagtacctgcaccgcatggagaca
gaggaggcccaggaaatggcccagatgccaggcagggacagcccacccgccaacgaagcg
tccgaggaggccgaggagcccatggccgtccccgaggacctgtcagccaactccgcccac
cagcagaacaacaacagaggcgacaaagcctgtaacattaaagttgaggctcgcagtgat
gaggagaatgggctggcctgtgacatgaatggcgtggaggaggaggagtgtgcggaagac
ttgcgcgtgatcgatgcctcgggggccaaggtgaacggctcacagccgagccccgaagcc
aaggccttctcctcggccggcggtatccggctgcccaacgggaagctcaagtgcgatatc
tgtgggatagtttgcattggccccaatgtgttgatggtgcacaagcgaagccacactggt
gaacgtcccttccagtgcagccagtgcggcgcctccttcacccagaagggcaacctgctg
cgccacatcaagctccactcgggggagaaacccttcaagtgtcacctgtgcagctacgcc
tgccgcaggagggacgccctcaccggccatttacgcacccactcggttggaaaaccccac
aagtgtgcttactgtggaaggagctacaagcagcgcagctccctggaggagcacaaggag
aggtgtcacaactacctgcagtgcatggggctgcagaacagcatctacacagtagtaaag
gaagaaagcaaccagaatgagcagagggaagacttaagccagacgggatctgacagagcc
ttggtgctagacagactagctaataatgtagctaaacgtaagagcactatgccacagaag
tttgtgggcgacaaacgtctgtcagacctctcctacgacggaggagcaggcgagctgatt
cagccccacgtcatcgaccaggccatcaacagcgccatcagctacctgggtgccgagtct
ctccggcccctggtccagacctccccggcctcctcctccgacgtggccctcggctccatg
taccccctccacaagcaggcgcaggagggccacgcggggtcgggccacggcctgtccgcc
aaagacagcgcggcggagaacctgctgctgctctccaactccaagtccgcctccagcgag
aaggacggctcgcccagccacagcggccaggactccaccgacaccgagagcaacaacgag
gagcgtccgggcggggcggcgccgggcctcatctacctgaccaaccacatcacctccggg
gtgaggaacggcgtgctccccctggtgaaggaggagcagcagaggcagtacgaggccatc
cgggccagcatggagatggcctctgagggcttcaaggtggtggcggcggacggggagcag
gtgagggcgtaccggtgcgaacactgccgcgtcctcttcctggaccacgtcatgtacacc
attcacatgggctgccacggcttcagagaccccttcgagtgcaacctctgtggtcaccgg
agtcaagaccgatacgagttctcctctcacataacacgaggggagcatcgcttctga
DBGET
integrated database retrieval system
