Lates calcarifer (barramundi perch): 108886279
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Entry
108886279 CDS
T04895
Symbol
zgc:110045
Name
(RefSeq) poly(rC)-binding protein 3 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108886279 (zgc:110045)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108886279 (zgc:110045)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
DUF1598
Motif
Other DBs
NCBI-GeneID:
108886279
NCBI-ProteinID:
XP_018536557
UniProt:
A0A4W6D249
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Position
LG16_LG22:complement(1679790..1691545)
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AA seq
433 aa
AA seq
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MSDKEEMASDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPER
IVTITGPTEGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGG
SKIKEIRETTGAQVQVAGDMLPDSTERAVTISGTPQAITQCVRHICSVMLESPPKGATIP
YRPKAIPAGAHAVLAPQHSAQAFAIPGQYAFAHQDLTKLHQLAMQHIPLPSLGQSNPTFP
GLDASAPASSQELAIPNDFIGCIIGRQGSKINEIRQVSGAHIKIASATDGSAMRQVTITG
SPASISVAQYLINASLEMAKYTMQAASSATPVDLNMSFSQSAPTASTAATSMAVLAASTP
APTTINVHSPSTLPTIQNPHYAVPVSSLLGMKTLPVLVHPAAASGLTQGLSPYTAKMPTS
GVKKSERQKFAPY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaggaagaaatggcttcagatgggagtctgaatgttaccctgacgttgagg
ctgctgatgcacggaaaggaagttggcagcataattgggaagaaaggagaaaccgtaaag
aaaatgagggaggagagcggagcacgcatcaacatatcagagggatcgtccccggagaga
atagttaccatcacggggccgacagagggcatcttcagagctttctccatgatcgcacag
aagtttgaggaggacattactgcagcgatgacaaacagcaacgtgacaagcaagccacct
gtgacacttcgcctggttttcccagggagccagtgtggctcactgattggcaaaggaggc
tcaaagatcaaagagatcagagagaccacgggcgctcaggttcaggtggcaggagacatg
ctgccggactctacggagagggctgtcacaatctccggcactccacaggccatcactcag
tgtgtaagacacatctgctccgtcatgctggagtctccgccaaaaggagcgactattccc
tatcgtcctaaggccatacctgcaggagcccatgcagtattagcaccacagcactctgca
caagcctttgcaattccagggcagtacgcttttgcgcatcaagatttgaccaagcttcac
cagttggctatgcagcatatccccctcccttcccttgggcagagcaaccctaccttccct
ggattggatgcatctgcccccgcaagttcacaagagctggcgatacctaacgattttatt
ggctgcataattggaagacaaggcagcaagatcaatgagattcgccaggtctctggagct
cacatcaaaattgccagcgccactgatggctcagccatgcgccaagtcacgatcacgggc
tcgccggccagcatcagcgtggcccagtacctcatcaacgccagcttagagatggctaaa
tacaccatgcaggccgcttcctcagcgacccctgttgacctcaacatgagcttctctcag
tccgcccccactgcctccactgctgctacctctatggccgtcctggcggcctccacccca
gccccaaccaccattaacgtccactctccttccactttaccaaccatccaaaacccgcac
tacgccgtccccgtttccagcctcctcggcatgaaaactctccccgtcctggtccatccg
gctgccgcttccggcctaacgcagggtttatccccttacaccgcaaaaatgccgacctcc
ggcgtcaaaaaatcagagcggcagaagtttgctccttactga
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