Lates calcarifer (barramundi perch): 108886297
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Entry
108886297 CDS
T04895
Name
(RefSeq) E3 ubiquitin-protein ligase arih1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108886297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108886297
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108886297
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108886297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_14
zf-RING_5
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
108886297
NCBI-ProteinID:
XP_018536600
UniProt:
A0AAJ7V5H4
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Position
LG10:complement(11591666..11604591)
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AA seq
529 aa
AA seq
DB search
MDSDEGYNYEYDDEEEECSEDSAEEEPEDDTLELGEVELVDPVVAGGERDECGETGGGGH
GPGEEEEEDYRFEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERY
FDGNLDKLFSECHVINPSKKPRIRPPINTRSSAQDMPCQICYLNFPNSYFTGLECGHKFC
MQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVE
CNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLRKWIKKCD
DDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYN
CNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQH
NMSWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENATEVLSGY
LERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgagggttataactatgaatacgacgacgaagaggaggaatgtagcgag
gacagcgccgaagaggagcccgaggacgacaccctggagctcggagaggtggagttggtc
gatcccgtggtggccggtggggagcgagacgagtgcggcgagactggcggaggtggccac
ggcccgggcgaggaagaggaggaggactaccgcttcgaggttttgactgccgagcagatc
ctccagcatatggtggagtgtatcagggaggtcaacgaggtcatccagaaccctgcaaca
ataacacgcatccttctcagtcatttcaactgggataaagaaaagcttatggaaaggtat
tttgatggaaatctggacaagcttttctctgagtgtcatgtcattaaccccagtaagaag
cctcggatccgtcctccaatcaacactagatcttcagcgcaggacatgccatgtcagatc
tgctatctgaacttccccaactcttattttacaggactggagtgtggacacaagttctgc
atgcagtgttggggagattatctgaccaccaaaatcatagaggaaggaatgggacagacc
atttcttgtcctgctcatagttgtgacattttggttgatgacaacacagtcatgcgcctc
ataacagattcaaaagtgaagttgaagtaccagcatttaattacaaatagttttgtagag
tgcaatcgactgttaaagtggtgccctgcaccagactgccatcatgttgtcaaagtccag
tacccagatgcgaagccagtgaggtgcaagtgtggtcgtcagttctgcttcaactgcgga
gagaattggcatgatcctgtcaagtgtaagtggctgagaaaatggattaagaaatgtgat
gatgacagtgaaacttcaaactggattgcagcaaatactaaggagtgtccaaaatgccat
gtgaccattgagaaagatggtggctgcaatcacatggtttgtcggaaccagaactgcaaa
gctgagttctgctgggtctgccttggaccatgggaaccacatggctcagcctggtacaac
tgcaatcgctacaatgaagatgatgccaaggcagccagagatgcccaagagcgctccagg
gcagccttgcagaggtacctgttctactgcaaccgctacatgaaccacatgcagagcctg
cgctttgagcacaagctctatgctcaggtcaagcagaagatggaggagatgcagcagcac
aacatgtcctggattgaggtgcagtttctgaagaaggctgtggatgtgctgtgccagtgc
cgctccacactcatgttcacttacgtctttgccttctacctcaagaagaacaaccagtcc
attatttttgagaacaaccaggcagacctggaaaatgccactgaggtgctgtctggctac
ctagagcgggacatctcccaggattccttgcaggatatcaagcagaaagtacaagataag
tacagatactgtgagagcaggcgaagagtgctgctacagcacgtgcatgaaggctatgag
aaggacctgtgggagtacattgaggattga
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