Lates calcarifer (barramundi perch): 108886331
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Entry
108886331 CDS
T04895
Name
(RefSeq) EH domain-containing protein 2
KO
K12469
EH domain-containing protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108886331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108886331
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
108886331
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF5600
EH
Dynamin_N
EHD_N
MMR_HSR1
EF-hand_1
GTP_EFTU
RsgA_GTPase
PORR
AAA_28
EF-hand_5
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
108886331
NCBI-ProteinID:
XP_018536648
UniProt:
A0A4W6E7N3
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Position
LG21:7278144..7293367
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AA seq
544 aa
AA seq
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MSIRRLRSNPKTLGNVNMVTEELKNLYYKRLLPIEKYYSFHHFHSPSYEDADFDNKPMVL
VMGQYSTGKTTFIRYLIEQDFPGSRVGPEPTTDCFSALMYGEPEGIIPGNALTVDPKKPF
RNLDPFGNSFLNRFQCVQMPNPVLKSISIIDTPGILTAAKRKLSRGYDFPAVLRWFAERV
DRIILLFDAHKLEFSDELTRAFGALSSYEDKLRVVLNKVDRVDSQQLMRVYGALMWSLGK
VFRTPEILRVYIGSFWSEPRQMCDHYQLIELEEEDLLADIRNLPRNAAVRKLNDLVKRAR
LVRAHAHIISYLKQEMPTIFCKESKKHNLIYQLPVIFTKIQQQHRVPAGDFPDCTKMQEK
LLSQDFSKFKTLKPSLMASLDKLLTTDIANLVPLLQKQELRKKSLPGVLDGDFLGTFRPE
HYKRDPFKELPRDDESSEADFVEWVVEKYKPKYDEIFYNLSPSEGKLSGTKVKEWMTTTL
LPNSVLAHIWRLSDVDGDGMLDNEEFALAVHLIEGKLEGHWLPRELPSHLVPPSKRLSTA
SEDE
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccggaggcttaggagcaaccctaaaacactggggaacgtcaatatggtgaca
gaggagctgaagaatctttactataagaggctgctgccgatagagaaatattactctttc
catcacttccactctccaagctatgaggatgcagactttgacaacaaaccaatggtgctg
gtgatgggacagtactcaactggaaagacaacttttatcaggtatctcatagaacaagat
tttcctggcagcagagttggaccagagccaaccactgactgcttcagtgctctcatgtat
ggtgagccggaaggaatcatccctgggaatgccctcacagtcgaccctaaaaagcctttt
cgcaaccttgacccctttggaaattcttttctgaacaggtttcagtgtgttcagatgcca
aatcctgtccttaaaagcatcagcattattgacacaccgggcatcttaactgctgcaaaa
agaaaactgagtcgaggctatgacttcccagcagtgctgcgctggttcgctgagcgtgtg
gatcgaatcatcctgctgtttgatgcacataaactggagttctctgatgagctcactcgg
gcctttggggccctgagcagctacgaggataagctgcgtgtggttctcaacaaggtcgac
agggtggactcgcagcagctcatgagggtgtacggtgccctcatgtggtcgctggggaaa
gtgttccgaacccccgagatcctgcgggtttacatcgggtctttctggtcagagccgaga
cagatgtgtgaccactatcagctgatagagctggaggaggaggatcttttggccgacata
aggaatctcccacgcaatgctgcagtacgtaagctgaatgacctggtgaagagggcacgc
ttagtaagggctcacgcacacattatcagctatcttaagcaggagatgccgaccattttt
tgcaaagaaagcaagaagcacaatctgatttaccagcttcctgtaattttcaccaagatc
cagcaacagcatcgagtcccagctggagatttccctgattgcaccaagatgcaggagaaa
cttctgagccaagatttctcaaagttcaagacactgaaaccaagtctaatggcttccttg
gataaactcctgaccaccgacatagcaaacctggtgcctttacttcaaaaacaagaactg
aggaagaaatccctccctggtgtgttggatggtgattttcttggaacattcaggcctgag
cattacaagagagatcctttcaaggaactccccagagatgatgagagcagcgaggcagat
tttgtcgagtgggtggtggagaaatacaagccaaaatacgatgagattttctacaacctc
agtccaagtgagggaaaactgagcggcaccaaagtcaaagagtggatgacgaccacgctt
ctgcctaactccgtgctcgctcatatctggaggttgtctgatgtggacggagatggcatg
ttggacaatgaggagtttgctttagcagtccaccttattgagggaaaactggagggccac
tggctcccgcgagagctgccttctcacctggtgccaccgtcaaaacggctaagtacagcc
agcgaggatgagtaa
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