Lates calcarifer (barramundi perch): 108886456
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Entry
108886456 CDS
T04895
Name
(RefSeq) methylosome protein 50
KO
K13221
methylosome protein 50
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108886456
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108886456
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
EIF3I
WDR55
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
MIOS_WD40
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
108886456
NCBI-ProteinID:
XP_018536849
UniProt:
A0A4W6G394
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Position
LG12:22748672..22751717
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AA seq
337 aa
AA seq
DB search
MKSAVDTSMIKENRWNIPPNAPACMEKHLCSAQYRADGTLLLGASSLTGRSWQGSVWIYS
DPEQAPNEGFCKAGVQTEAGVTDVKWVSEKGVVVASDSGALELWELAEDERLLMNRFTKH
EHDHIVTTVSPITGASSAVTGSMDCRIKVWDLSQETVVTTYSVHTQPVRCVACSPTDESL
FISCGQDGRVLMWDRRKPNKPATRIDVEAPSCSPTTVAWHPHRRSTIAFGDELGRVTVKD
FLGTEPTQVENIHSRRVNALAYSSHSAPLLAAVSDDCSLAVMNSELREILRDRRHQDFVK
GVSWLHGGSNTLTTVGWDHLVLHHSVGSAAEAPNSSS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgcagttgacacaagcatgatcaaggagaaccgatggaacataccccccaat
gctccagcatgcatggagaagcatctctgctcggcgcaatacagagcagatggcaccctg
ctgcttggtgcctccagcctcactggcaggagctggcagggatcagtgtggatctacagt
gaccccgagcaggcccccaatgagggattctgcaaagctggcgtgcagactgaggctggt
gtcacagatgtcaaatgggtgtcagaaaagggtgttgttgttgcatcagactcaggtgcc
ttagagctctgggaactagcagaggatgagcgcctgctcatgaatcgcttcaccaaacat
gagcatgaccacattgtcaccacagtgagccccataactggagcaagcagtgctgtcact
ggcagcatggactgcagaattaaagtatgggatctcagtcaggagacagttgtcactacc
tacagtgtgcacacacagcctgtcagatgtgttgcttgcagtccaacagatgagtctctc
ttcatctcctgtggtcaagatggtcgtgtgctgatgtgggacaggaggaagccaaacaaa
ccagcaacaagaatagatgtagaagctcccagctgctcaccaaccactgtagcttggcac
cctcaccgcagaagcaccattgcttttggtgatgagctcggtagagtgactgtgaaggat
ttcctgggaacagagccgactcaggtggagaacatccatagccgtagagttaatgcgctc
gcctactcctcacatagtgctcccttactagctgccgttagtgatgactgctcccttgct
gttatgaactccgaactgcgggaaatactgagagatcgacgacaccaggactttgtcaaa
ggtgtgtcctggctccacggtggctccaacaccctcacaactgttggctgggatcatctt
gtgcttcaccactcagtgggttcagctgctgaagctcccaactcctcctcttag
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integrated database retrieval system