Lates calcarifer (barramundi perch): 108886464
Help
Entry
108886464 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 15-like
KO
K13190
RNA-binding protein 15
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108886464
03041 Spliceosome [BR:
lcf03041
]
108886464
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
108886464
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108886464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
108886464
NCBI-ProteinID:
XP_050930353
UniProt:
A0AAJ8BEV4
LinkDB
All DBs
Position
LG12:complement(22846727..22851442)
Genome browser
AA seq
853 aa
AA seq
DB search
MKGKERSPVKKRLRAPDDSRERGGSHPSGKKTGALLTVGSNNGNGSAQSGASSRRSLHSD
KRDMRDSDGHNSSSRTGSGYDYGVVSGNKPHVGADTAAETPRSGSRSDSRPTSNAESEYK
TLKISELGSQLNDEEIEDGLFHEFKKFGDVSVKISRENDERVAFVNFRRPDDARAAKHAR
GRLVLYDRPLKIETVYMNRRRSRSPVSKDSFPSGHRHLHTQRALSPTGLGYRDYRLQQLA
LGRLPPPPPPPPPPHIRDLERERDFSVYEARNRPPFIPECAAFRDEDLMTPEDDQRANRT
LFLGNLDVSVTESDLRRAFDRFGVITEVDIKRAVRGQTNTYGFIKFENLDMAHRAKVAMA
GKVVGHNPIKIGYGKPTPTTRLWVGGLGPWVPLAALAKEFDRFGTIRTIDYRKGDLWAYI
QYESLDAAQAACTHMRGFPLGGPDRRLRVDFADTEHRYQQQQFVQLPLPLPHYDLIPEPF
AHRLTDSVRVRDRSPPLPGRFRDRDLYSTAEWSGLGVHDRMRGAGFDPIDRLERRSRETW
SLEHERELQSRDLSRKRRHLDDGWRLDRSPESGDYGQRRHGSSLERSPGGSSRDGGRYSD
PERLPRSGRASPVRERQNSQDIGFGDKRRRTLSPTEPGSFSDKDRKRKASDSSKSPGRKE
DRSEHPSNSSSSKSNQQSKVAVGGQKLSHVWQGVLLLKNSSFPTSLHLLEGDVSVATSLL
VDGATGGQVSQLKISQRLRLDQPKLDEVSRRIKVAGSNGYSILLAMPGKEGGTQDTDIST
ERPLKNLVSYLTQKEAAGIISLPVGGSRDKDHGGVLHAFPPCEFSKQFLDASAKAFAKSE
DDYMVMVIIRGAS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaaaagagcggtcgccggtgaagaaacgtcttcgggcgccagatgatagcaga
gagcgaggagggagccacccgagcggcaagaagacaggagccctgttgacggttggcagc
aacaacggcaacggctccgctcaaagcggcgcctcttccaggaggagtttacacagcgac
aaaagagacatgagggactcagacggacataattcatccagtcggactggtagcggctac
gactacggagttgtttcggggaacaagccgcacgttggcgctgacaccgccgcggagaca
cccaggtccggttcacgcagcgactcgcggcctacgtcaaacgctgaaagtgagtacaag
actctcaaaataagtgaactgggctcccagctgaacgacgaggaaatagaggacggactg
tttcacgagttcaagaagtttggcgacgttagtgttaaaattagccgagaaaacgacgag
agggtggcgtttgtgaacttcaggaggcctgatgacgcccgggcggcgaaacacgcccgc
ggcaggctggtgctgtacgaccggcctctgaaaatagagacggtgtatatgaacagacgt
agaagccgctcccctgtttcaaaagacagtttcccctcaggacacaggcaccttcacact
cagagagctctgtccccaactggtttggggtacagagactaccggttacagcagctggct
ctgggccgtctcccccctcctcctcctcctcccccgccacctcacataagagacctggaa
agagaaagagacttttctgtttacgaggccagaaatagaccaccgttcatccctgaatgt
gctgctttccgcgacgaggacctgatgacccctgaagatgaccagagggcaaacaggact
ttatttctgggcaatctggacgtcagtgtgacagaaagtgacctgaggagggcgtttgac
aggtttggagtgataaccgaggtggacattaagcgggcggtgagaggtcagaccaacacc
tatggattcatcaagtttgagaatcttgacatggctcaccgtgccaaagtcgcgatggca
gggaaagtggtgggccacaatccgatcaaaatcggctacggcaaacccacacccacaacc
aggctgtgggtgggagggctcggaccctgggttccactcgcagcactggccaaggagttt
gaccgttttggcaccatcaggactatagactacaggaaaggtgatttgtgggcttatatt
cagtatgaaagtctggacgctgctcaggctgcatgtactcacatgaggggcttccctctc
ggtggccctgacaggagactcagggtggactttgcggacacagagcaccgctaccagcag
caacagtttgtgcagctccctctccccctgccgcactatgacttaatccctgagcccttt
gcccaccgcctcactgactctgtgagagtgagagacaggtctcctccgcttcctggtcgc
ttcagagaccgagatctctactccactgctgaatggtccggcctgggggtccacgacagg
atgcgaggagcaggttttgatcccatagatcgtctggagaggcgttcacgggagacctgg
tcattagagcatgagcgggagttgcaaagcagagacctaagccgcaaaaggagacatttg
gatgatggctggcggctggatcgctcacctgagagcggtgactatggtcaacgccggcat
ggcagctcactggagcgcagccctggggggagcagccgagatggggggcgctacagtgac
cctgaacgcctgcctcgctctggcagagcctcacctgtcagagagcggcagaacagccag
gacattggctttggagacaagagaaggagaacacttagcccgactgaaccaggctcattc
tcagataaagaccgcaaacgcaaagccagtgactcttctaagagcccagggaggaaggag
gaccgctccgaacatccctcaaactcctcttcctccaaatctaaccagcagtctaaggtg
gcagttggaggacagaagctgagtcatgtctggcagggtgtcctcctgctgaaaaacagc
agctttcccacatcactgcacctgctggagggggatgtgtcggtggctaccagtctcctg
gtggacggcgccacggggggtcaagtgtcccagctgaagatcagccagcgcctgcgcctg
gaccagcccaagctggatgaagtctcccgacgcatcaaggttgccggctccaacggatac
tccatcctcctggccatgcccggaaaggagggagggacccaggacaccgacatctccaca
gagaggccgctgaagaacctggtgtcctacctgacgcagaaggaggcggctggcatcatc
agcctccctgtggggggcagccgtgacaaggaccacggaggagtcctacacgctttcccc
ccttgtgagttctcaaagcagttcttggatgcctctgccaaagcctttgccaaatcagag
gatgactacatggtgatggtcattatcagaggagcatcatga
DBGET
integrated database retrieval system
