Lates calcarifer (barramundi perch): 108886468
Help
Entry
108886468 CDS
T04895
Name
(RefSeq) sodium-dependent neutral amino acid transporter SLC6A17
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108886468
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108886468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Tmemb_18A
Motif
Other DBs
NCBI-GeneID:
108886468
NCBI-ProteinID:
XP_018536869
UniProt:
A0A4W6G344
LinkDB
All DBs
Position
LG12:22858720..22873487
Genome browser
AA seq
739 aa
AA seq
DB search
MPKNSKVTQREQSHEHVTESVADLLAHEEPLDYKSSSLNVGGAAGKKVPQLEVPENDGRP
AWNSKLQYILAQVGFSVGLGNVWRFPYLCQKNGGGAYLVPYFILLLIIGIPLFFLELAVG
QKIRRGSIGVWNYVCPRLGGIGMSSLMVCGFVGLYYNVIIGWSIFYFFQSFQYPLPWSEC
PIRKNGTLAIVEPECDKSSATTYFWYRQTLNTTSTIAESGGLNVKMTLSLFVAWIIVCLA
VIKGIASSGKVMYFSSLFPYVVLFCFLVRGLMLKGSVDGIAHMFTPKLEKMLEPQVWREA
ATQVFFALGLGFGGVIAFSSYNKIDNNCHFDAVLVSFINFFTSILATLVVFAVLGFKANI
MNEKCVVENAEKILGYLNSNVLSHDLIPPHVNFSHLTTSDYAEMYGVIKTVKEGSFSQLG
LDPCVLEDELNKAVQGTGLAFIAFTEAMTHFPASPFWSVMFFFMLINLGLGSMIGTMTGI
TTPVLDTYKVQKELFTVGCCIVAFLCGLLFVQRSGNYFVTMFDDYSAGLPLTVVVILENV
SVAWIYGTKRFMQDLEDMLGFRPYMIYFYLWKYVSPLCLIVLISATVIEMAISPPGYNAW
VQELAQERFQSYPPWALAMCFALIIVAMLPLPVVFIARHFNLMSDGSNKLSVSYRKTMMK
DMSNLEEQDEARSILGAKPGEVPSSVPTRKAYLTPGGNKPLDPNSLSPNSCYGTSYQNAA
ISPTTPTTPTTPVTPESDS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaacagcaaggtgacgcagcgcgagcagagccatgagcacgtcacagagtca
gtggccgacctgctcgcacacgaggagccactcgactacaagagcagctccctgaatgtc
ggaggggctgctgggaagaaagtcccgcagctggaggtgcctgaaaacgatgggcgtccc
gcctggaacagcaaactccagtacatcttggcccaggtgggcttctctgtgggcctgggc
aacgtgtggcgtttcccttacctgtgccaaaagaatggaggaggtgcctacctggtaccc
tacttcatcctcctcctcatcatcgggatcccgctcttcttcttggagttggccgtgggt
cagaagatccgacgtggaagcatcggggtgtggaactacgtctgtccccgactgggcggg
atagggatgtcaagtctgatggtgtgtggctttgtgggtctctactataatgtgatcatc
ggttggagcatcttctacttcttccagtcctttcagtatcctctgccatggagcgaatgt
cccatcagaaagaacgggacacttgctatcgtggagccggagtgcgacaaaagctcagcc
acaacctatttctggtaccgtcagactctgaacacgaccagcaccatcgcagagagcggc
ggcctcaacgtcaagatgaccctgtctctgtttgtggcctggatcatcgtctgtctcgcc
gtcattaaaggaatcgcctcctctgggaaggtgatgtacttcagctctcttttcccctat
gtggtgctgttctgtttcctggtccgggggttaatgctgaaggggtcagtggatggcatc
gctcacatgttcactcccaagctggagaagatgttggagccccaggtgtggagggaggca
gccacccaggtcttcttcgctctgggtctgggctttggaggagtcatagctttctccagt
tacaacaagatagacaacaactgtcattttgacgctgtgctcgtctctttcatcaacttc
ttcacctccattctggccacgctggtggtatttgctgtgctgggcttcaaggccaacatc
atgaatgagaagtgtgttgtggagaatgccgagaagatcctgggatacctcaactcaaac
gtcctgagtcacgatctcattcctccacatgtgaacttctctcatctcaccacatcagac
tatgctgagatgtacggcgtcatcaaaacagtcaaagagggcagcttctcccagctgggc
ctggatccttgtgtcctggaggacgagctcaacaaggccgtccagggcactggtctggct
ttcattgccttcacagaggccatgactcatttcccagcgtctccattctggtcggtcatg
tttttcttcatgctcatcaacctcggcctgggcagcatgatcggcaccatgactggcatc
accacgcccgtcctcgacacctacaaagtccagaaggagcttttcacagtgggttgctgc
atcgtggccttcctgtgtggcctgttgttcgttcagcgctcagggaattactttgtcacc
atgtttgatgattattctgctggtctgcctctcactgttgtggtcatcctggaaaatgtg
tctgtcgcttggatttacggcactaaaaggttcatgcaggatctggaggacatgttgggt
ttccgaccgtacatgatctatttctacctgtggaagtacgtctcccctctctgtctcatt
gtcctcatctcggccaccgtcatagagatggccatcagcccaccgggatacaacgcctgg
gtccaagagctggctcaggagcgcttccagagctaccctccctgggcgctggccatgtgc
tttgctctcatcatagtggccatgcttcctctccctgtcgtcttcattgcccgtcacttc
aacctgatgtcagacggctccaacaagctgtccgtctcctaccgtaaaaccatgatgaag
gacatgtccaacctggaggagcaggacgaggcccggtccatcctcggcgccaagcccggc
gaggtgccgtcgtcggtgccgacacgcaaagcttacctcacccctggagggaacaaaccc
ctggaccccaactccctgtctccaaacagctgctacggcacaagctaccaaaacgccgcc
atcagtcccaccacgccaaccacgccgaccacgcctgtcacaccagagtctgattcttga
DBGET
integrated database retrieval system
