Lates calcarifer (barramundi perch): 108886472
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Entry
108886472 CDS
T04895
Symbol
srsf3b
Name
(RefSeq) serine/arginine-rich splicing factor 3b
KO
K12892
serine/arginine-rich splicing factor 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03040
Spliceosome
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108886472 (srsf3b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108886472 (srsf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108886472 (srsf3b)
Spliceosome [BR:
lcf03041
]
Common components
Common spliceosomal components
SR proteins
108886472 (srsf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
108886472
NCBI-ProteinID:
XP_018536872
UniProt:
A0AAJ7V5J9
LinkDB
All DBs
Position
LG12:22905357..22909833
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AA seq
165 aa
AA seq
DB search
MHRDCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATD
AVRELDGRTLCGCRVRVELSNGEKRSRTRGAPPSWSRRPRDRDDYRRRSPPPRRRSPRRR
SFSRSRSRSFSRDRRRERSLSRDRNHKPSRSFSRSRSRSRSNDRK
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtgactgtcctctcgactgtaaagtctatgttggaaacttgggcaacaatgga
aacaagacagagttagaaagagcgtttggctactatggccctctccgcagtgtatgggtg
gccaggaaccccccaggctttgcttttgtagaattcgaggatcccagagatgcaactgat
gcagtgcgagagcttgatggaaggacgttgtgtggttgccgagtgcgagtagagctgtct
aacggtgagaaacgcagtcgcacccgtggcgctcccccttcatggagcaggcgtccccga
gaccgagatgactacaggcgtcgtagcccaccacccaggcgaagatccccacgcaggagg
agcttcagccgcagtcgtagcaggtctttctccagagacaggaggagggagaggtccctc
tcccgggacaggaaccacaaaccttcgagatccttctctcgatcaaggagccgctccagg
tctaatgacagaaaatag
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