Lates calcarifer (barramundi perch): 108886474
Help
Entry
108886474 CDS
T04895
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 49
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108886474
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108886474
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108886474
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108886474
Ubiquitin system [BR:
lcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108886474
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
108886474
NCBI-ProteinID:
XP_018536874
UniProt:
A0A4W6EI98
LinkDB
All DBs
Position
LG12:complement(22929092..22936457)
Genome browser
AA seq
677 aa
AA seq
DB search
MDRCKHVGRLRLGHDHSILNPQKWHCVDCSTTDSVWACLKCSHVACGRFMEEHSLKHFQE
SHHPLAMEVRELDVFCFACGDYVLNDNAEGDLKLLRGALSTVRSPGRRSLRSSTGGECTP
WVGEGGPQPAMQLALRHRRKALLGKMFQTWIGKHQELQNQRKEKLEEARRQKKEVKRRLM
EELGNVPPRKSARLLTQAPRSTITLIPRKFRDPPERLPPPPKKPSLLTLSRKAPQNGRAA
KLRRYYSTHAVTRRRPAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDLCETEEL
LAKTNHSQGMKGVTGGVVSSGNTALSGCPLGRMGKAGSWNLPVGKKESALPSPQAAELVQ
PKEPRCSTRQQMSLCHELHTLFRVMWSGRWSLVSPFAMLHSVWNLIPAFRGYDQQDAQEF
LCELLDKVQQELDTEGSKRRIVIPITKRKLSKQVLKVLNTIFHGQLLSQVTCLSCKHKSN
TVEPFWDLSLEFPERYHSVDKGSGSTAYQRSCTLTEMLSKFTEMEALEGSIYACNHCNKR
RRKSSHKPIVLSEARKQLLIYRLPQVLRLHLKRFRWSGRNHREKIGVHVAFDQVLNIKPY
CCTGSGHSVHRGGYTYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSEMKVCSVE
EVCNTQAYILFYTQRSA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttgtaagcacgtgggacgccttcgtctgggccacgatcactccatcctcaat
ccccaaaaatggcactgtgtggactgcagcaccaccgattcagtgtgggcctgcctcaag
tgctcccacgtggcctgtggacgtttcatggaggagcactcgctcaaacactttcaggag
tcacaccacccactggctatggaggtgcgtgagctggatgtcttctgcttcgcctgtgga
gactatgtactcaatgacaatgcagagggagacctcaaactcctcagaggggcgctctct
actgttcggagcccaggtagacgctcgctacgttcctcgactgggggggaatgcacccct
tgggttggggaaggtgggccgcagcctgccatgcagctggccttgcgtcacaggaggaaa
gcgctcctagggaagatgtttcagacgtggatcggcaaacatcaggagctgcagaatcaa
cgcaaggagaaactcgaggaagctagaagacaaaagaaagaggtaaaaaggagactcatg
gaagagcttggcaatgtacctcccagaaagagtgctaggcttcttactcaggcgccacgt
tcaacgatcacactcattcctcgcaaatttcgcgaccctccagaacgcctacctcctcct
cccaagaagccttcccttctaaccttgtcccgtaaggctcctcagaatggcagagctgcc
aaactgaggagatactactccacacatgcggtgacccgtcggagacccgctccaggtgtc
actggtctgcgcaacttggggaacacatgctacatgaactcaatattgcaagtgctgagc
cacctgcagaaattcagggagtgttttctcactttggacctgtgtgagactgaggagctg
ctggccaagaccaatcactcccaggggatgaagggggtaacaggaggtgtagtcagcagt
ggtaacacagcgctgtcaggatgccctctgggacgcatggggaaggcaggcagttggaat
ctgcccgtgggcaaaaaagaaagcgctctgccttccccacaggccgcggagctggtccag
cccaaggagcctcggtgctccacccgccagcagatgtctctgtgccatgagttgcataca
cttttcagggtcatgtggtcaggccggtggtctttggtttctcccttcgccatgctgcac
tctgtgtggaacctcatcccagctttccgaggatatgaccagcaggacgcccaggagttc
ctgtgtgagctgctggacaaggtgcagcaggagctggacacagaggggtccaaacgcagg
atagttatccccatcacaaagaggaaactatccaaacaagtgctaaaggtccttaacacc
atttttcatgggcagctactcagccaggtgacgtgtctgtcctgtaagcacaagtcgaac
acagttgagccattctgggatctgtctttggagtttccagagcggtaccacagcgtagac
aaaggctcaggctctacagcttaccagcgcagctgcaccctcactgagatgctgtccaag
tttacagagatggaggctcttgaaggcagcatctacgcctgcaaccactgcaacaaaaga
agacggaaatcatcccacaaacccatagttctgtcagaggcacgtaagcagcttctgatc
taccgcttacctcaggttctacggctgcacctcaaacgcttcagatggtcggggcggaac
catagggagaaaatcggcgtccatgtggcctttgaccaggttctgaacatcaaaccatac
tgctgcacaggctcaggtcactctgtccacagaggaggctacacctacgatctgtctgct
gtagttatgcatcacggcaaaggcttcggctcagggcactacaccgcatactgctacaat
acagaaggaggtttctgggtccactgtaatgactctgagatgaaggtttgcagtgtggag
gaagtgtgcaacactcaggcctatattctcttctatacccagaggtctgcctag
DBGET
integrated database retrieval system
