Lates calcarifer (barramundi perch): 108886495 Help Entry 108886495         CDS       T04895                                  Name (RefSeq) LOW QUALITY PROTEIN: rootletin   KO K16469   rootletin Organism lcf  Lates calcarifer (barramundi perch) Brite KEGG Orthology (KO) [BR:lcf00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:lcf03037]     108886495 Cilium and associated proteins [BR:lcf03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    108886495 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rootletin FKBP15 CCDC39 DUF2987 Motif Other DBs NCBI-GeneID:  108886495 NCBI-ProteinID:  XP_018536895 UniProt:  A0AAJ7PRS0 LinkDB All DBs Position LG12:complement(23179431..23195972) Genome browser AA seq 2024 aa AA seqDB search MSAAENSDTDSNKLESVIQRLEESVLSEEKRLTVRGPSPDAPPTCLPARVREIVTKNLTD SSAGAMSSVMSLQEENRVLQGELARLEDLLAHSRADRDELAIKYGAISERLEQALRFDTG DGDHDSPESRSLAQQNVDLRRRLDEEQAAYKRKLTAYQEGQQRQAQLVQKLQAKVLQYKK KCGDLEQMLQEKSSEMEKHRLSSHSESSNGRHQEESSSNLEDALIRLEEEQQRSSSLSAV NAMLREQLEQAGLANEALSQDIRRLTADWTKAREELEQKESDWRREEESFHSYFSSEHSR LLMLWRQVVGFRRHVCELKSSTERDLSDMRNELARAAHSAQVSCTGLSATMHSREGGAAL AVEREKALRVQLEQQLRERVAEMMNLQTRTDAERSELNVRLSESVREAERLKGQMEERDR EMVVLTRRLEEQSGNDETDMQMMRAHTDTLLDTLRDIAQTVLSDADSSSEADQDNSGAPL LALIRGSSPHRSSSPRRSSSPSRPPSSLAALPEAALSALRSAVTNKTLQLQDVRGRLLST QSSLQQLRKQFSEADSAKRDAEQRNQALQRERDAAQRERETTQREKERLKQERDTLASEK VSLEKAVQAAQSSNQILQMDCEKLQLTVMSTQRERDHEREEKEATIQERDRAKAETQRIQ KQWDQSESRASAQRGELSAVKETHQQGEVERQLLEREKAQLSEALARTESKNAELSLLFN KLQSEDAGLRDSLAKMGSMNESLAQDKVDLNTYILQLEEEKALLQTQKREAEQEKLTIRD ELVRLEQDRLELDSARITLHQSLQDTELSRVGMEAELQSLRADRLKLQERVTQLCGEVTT LGSELSLARGEGQRNEVALEEVGRGRAELARDKAALVVQLTASERENTVLSEELAAFRSE RESLETSLFEVQQQLIQVESRREQLESENQNLRVRCETAAAELRRVRSDGENALAQAERE KQALTQALNAAQLEAQQSLRKAISEHQEEVERLVSEKEVVRHSLLMEHEVALRKLRQEQE DQLHRAQREREELQDELRSLQHDRDQSLLQAETEKQQALSLKEAEKTILSDRVSSLQAEL SAAALEAERMSREAAHYKEQEQVRVGALTIELLELRSQLEDAASVHERELRSVRETCTDL QSRVDVALKELDQCRASLSASEESRDQLRRDMLDIERRLSQTQDAADNHRRESTELRRNL GDVSKERDTLSQSNTQLRETLRSAETERISVKRQCEEKEQRLAVLEENFSSAQKEVAELR SCLREVERSRLEARRELQELRRQLKVLDGEKEQKGREVAEMQTRLSLEEQREEERGKEVF TLKQKLTEAEAARDSLKKELSLTQKRLMESESGWRSCERELTAQLQEARGCEKKLQDEAK NLSLRAQAAQDSAAQSSLQLSEAQGRLAATEAELARAEAGRRDLEFRLSSLQSALTRTLG IGAGGRGGRGRSPGGSSASPGTMSRHHSISPLRSSLSPPKEFRVSTPDNTLGSGALSPER GDTPLPLPQPELDPETLRSGLRDFLQELRDAQRERDDARCQLGALQREVEELTQERDSAQ SRLTQLQNTLQEYQEGRRGLDERLTTTQILLQQQEETVRRGDRERRALADRVKDLERALQ ASETDKKHTQDQLNKQRAAEMRLEAERKRLREALEAAEARATRVELGRRSLEGELQRLKL SLGDREAESQASQDRHDSLLKQVAEGEVRVSLLQREVERLSQALLKAQEGESLLKEKTTS LNQSLQEAAAAHSSTQSRLVALQKSLTAAEQDKRLLQERMDEVRASSAEARRNVATLTER MQNLQSDLNQSELRREELEAELNNTQEALRQRSAALAEAQRSAQLAQTERLAVEERLRGL QRAVAMLETEKKDAERQAVRLEKDKNALRNTLDKVERQKLKTEEGSMRLSAEKSRLDRSL NTTEQELQEAQQQILMLQTQLAEMEQSHNLCESLARQRDEVQREAERLRTSFRDIERTLG TRERAHRHRVKGLEEQVSTLKEQLQQEMKRRQPSLPSSLLSAGK NT seq 6075 nt NT seq  +upstreamnt  +downstreamnt atgagcgctgcggaaaactcagacacggactccaacaaactggagtctgtgatacagagg ctggaggagagtgttttgtctgaggagaagaggctgacggtccgaggtccttcacctgac gccccccctacatgtctaccagcacgagtgcgagagattgtcacaaagaacctcactgat agctcagcaggggccatgtcctcggtcatgtctctccaggaggagaaccgggtgctgcag ggagagctggcgaggctggaggacctgctggcgcacagcagagcggaccgtgatgagctc gccatcaagtacggggcaattagtgagaggctggagcaggcactgcgtttcgacacggga gacggggaccatgactcgcccgagtcgcgcagcctggctcagcagaatgtggatttacgc cggcggctggacgaggaacaagcggcctacaagcgcaaactcaccgcgtaccaggagggt cagcagagacaggcgcagctggtgcagaagctgcaggccaaggtgcttcagtacaaaaag aagtgtggggatctggagcagatgctgcaggagaagtcctcagagatggagaaacacagg ctgagtagtcacagtgaatcgtcaaatggtcggcatcaagaagaatcaagcagcaacctg gaagatgctttaatccgtctggaggaggaacaacagaggagcagcagtctgtctgcggtg aacgcgatgctgagggagcagttggagcaggccggtttggccaacgaggctctcagccag gacatccgaaggctcactgctgattggaccaaagccagggaggaactggagcaaaaggag tctgactggaggagagaagaggagtctttccacagttacttcagcagtgagcacagccgt ttgctgatgctgtggcgacaggtggtcgggttcaggaggcatgtctgtgagctgaagagc tccactgagagggacttgtctgacatgcgtaatgagctggctcgggcggcccactccgcc caggtgtcctgcacggggctgtctgccacgatgcacagccgtgagggaggagctgctctg gccgtggagcgggagaaagctctgagggtccagctggagcagcagctgagagaacgagtg gcggagatgatgaatcttcagaccagaacggacgcagagagaagcgagctcaacgtcagg ttgtcagaatcagtgcgagaggcggagagattaaagggccaaatggaagagcgggacaga gaaatggttgtcctgacgaggaggctcgaggagcagagtggcaatgatgagactgacatg cagatgatgagagctcacactgacacactgttggacacactgcgggacatcgctcagacg gttttgtcagatgcagactcatcatcagaggcggaccaggacaactccggggctccgctg ctggccctgatacgcggctcctcacctcaccgctcctcctctcctcggaggtcgtcctcc ccctcccgacccccgtcctccctggctgctctcccagaggcggcgttgtcagctctccgc tctgcagtcacaaacaagacgctccagctgcaggatgttcgagggcgtctgctctctacc cagtcttcattacaacagttgcgaaagcagttttcagaggcagattcggcaaaaagagac gcagagcagcgaaaccaagccctgcagagagagagggatgctgctcagagagaaagggag accacacagagagagaaggagcgcctgaagcaggagagagacacgctggccagcgagaag gtgagcttggagaaggccgtgcaggcggcgcagagcagcaaccagatcctgcagatggac tgcgagaagctgcagctgactgtgatgtccacgcagcgagagcgcgaccacgagagggag gagaaggaggccaccatccaggagagagaccgggccaaggcagagactcagaggatacag aaacagtgggatcagagtgagagtcgcgcctcagctcagcgtggagagctgtctgcagtg aaggaaactcaccagcagggggaggttgagaggcagctgctggagagagagaaagcccag ctgtccgaggcacttgctcggactgagagcaaaaatgcagagctctctctgctgttcaat aagctgcagtctgaggacgcaggtctcagagactctctggccaaaatgggcagcatgaat gagagcctggcccaggataaagtcgacctgaacacctacatcctccagctggaggaggag aaggccctcctgcagactcagaaacgggaggcggagcaggagaagctgaccatcagagat gagctggtccggttggagcaggaccggctggagctggactccgcccgcatcactctgcac cagtcgctgcaggacaccgagctaagccgggtcgggatggaggcagagctccagagcctc agggctgatagacttaagctgcaggagagagtcacccagctctgcggtgaggtgaccact ctgggatcagagttgagtctcgccagaggagagggccagaggaacgaggtggccttggag gaggtcggccgcggtcgggcagaactggcccgagacaaggcggctctggtggtccagctg acggcatcggagagagaaaacactgtgctgtcagaggagctggctgctttcaggtcggag cgggagtccctggagaccagtctgttcgaggtgcagcagcagctcattcaggtggagtct cgcagagagcagctggagtcggagaaccaaaaccttcgagtccgctgtgaaactgctgct gctgaactgaggcgtgttcgctcagatggggagaatgcgttggcccaggctgagagggag aaacaggctctgactcaggcactgaacgctgcgcagctggaggcccagcaatctttacgc aaggccatctccgaacatcaggaggaggtggagagactggtctcggaaaaggaagtcgtg cggcacagcctgctgatggagcatgaggtcgcgctgaggaagctcaggcaggagcaggag gatcagctccacagggcgcagagagaaagagaggagctgcaggatgagctgaggagtctg cagcatgacagagatcagagtctgctgcaagctgagacggagaaacaacaggctctctct ctgaaggaggcagagaaaacaattttgtctgacagggtgtccagtctgcaggccgagctg tcagctgcagccctggaggccgagaggatgtccagagaagcagctcattacaaagagcag gagcaggtcagagttggggcgctgacgattgagctgctggagctccgctctcagctggag gatgcagcctctgttcacgaacgtgaactccgcagtgtgcgagagacttgcactgacctt cagtcacgtgttgatgtcgctctcaaagagctggaccagtgcagagcttctctgtctgcg agcgaggagagtagagaccagctgagacgggacatgctggacatcgagcgacgtctcagc caaacgcaggacgcagcagacaaccacaggagagaaagcacggagctgcgacgcaacctt ggcgacgtcagcaaggagagggacactctcagccaatcaaacacccagctgagagaaact ctgcgaagtgcagagacggagagaatcagtgtgaaacgacagtgtgaggagaaggagcag cggctggcggtgctggaggagaatttttcatctgctcagaaggaggtggcggagctgcgg agctgcctgagagaagtcgaaaggtcgcggctcgaagctcggagagaactgcaggagctc cgcagacagctgaaggtgctggatggagagaaggagcagaaagggagggaggtggcagag atgcagactcgcctgtcactggaggagcaaagagaggaggagagagggaaagaagttttc accctcaaacagaagttaactgaagctgaagcagccagagattcccttaagaaagagctt tccctgactcaaaagcgcctgatggagtccgagtcaggctggcgcagctgcgagagagaa ctgaccgctcagctgcaggaggcgcgcggctgcgagaagaagcttcaggacgaagcgaag aacctgtccctgcgagctcaggcggctcaggactccgccgctcagtccagcctgcagctg agcgaggcccagggccgactggccgccaccgaggccgagctggcccgggccgaggctggg aggagggacctggagtttcgtctgagcagtctccagtcggcgctgacaagaacgctgggc atcggggcaggcggcagagggggccgggggagaagcccgggggggagctcggcatcaccc ggcaccatgtcgcgacaccacagcatctcacccctgcgctcctcactctcacctccgaaa gaatttcgagtaagcacccctgacaatactttaggctcgggcgccttgtctcctgagagg ggggacacgccactgcccctccctcagccggagctggaccctgagacgctgcgaagcggt ctgagagacttcctccaggagctgcgtgacgcccagagggagcgggatgatgctcgatgc cagctgggggccctgcagcgggaggtggaggagctgacacaggagagagactcggctcag agtcgtctcactcagctacaaaacaccttacaggaataccaagaagggaggcgtggtctg gacgagcgtctcaccaccactcagattctgctccagcagcaggaggagacagtgaggaga ggagacagagagaggagagctctcgccgacagggtgaaggatttagagcgagcgctgcag gcctctgagacggataagaaacacacacaggatcagttaaataagcagcgcgctgccgag atgcgtctggaggcggagaggaagcgtctgcgggaagcgctagaggcagctgaagcccgg gccaccagggtggagctggggaggcgcagtctggagggggagctgcagaggctcaaactg agtctgggagaccgggaggctgagagccaggcctcccaggaccgccatgactctctcctc aaacaggtggcagagggagaagtccgtgtgtctctgctgcagagagaggtggagaggctg agccaggctctgctcaaagctcaggaaggtgaatctttactgaaagagaaaaccacttct ctaaaccagagccttcaggaggcggcggccgctcacagcagcacacagagtcgtctagtc gctctgcaaaagtcactgactgcagctgaacaggacaaaagacttctacaggaacgaatg gatgaagtgcgggcgtcatctgctgaagcgaggaggaatgtggccaccctcaccgagcgc atgcaaaacctgcagagcgacctgaaccagagcgagctgaggcgagaggagctggaagct gagctcaacaacactcaagaggccctgcgtcagcgttcggctgccctggcggaggctcag cgcagcgcccagttggctcagacggagcggctcgctgtggaggagagactgcgtgggctg cagcgagcggtcgccatgctggagacggagaaaaaagatgcagagagacaggccgtgagg ctggagaaagacaagaacgcactgaggaatacactggataaggttgaacgtcagaagctg aagactgaagagggaagcatgcgactttctgcagagaagagccgtttggatcgctctctg aacaccactgagcaggagctgcaggaagcacagcaacagatactgatgctgcagactcag ctggctgagatggagcagtctcacaatctgtgtgagagtttggcgaggcagcgtgacgag gttcagcgggaggcagagagactgaggaccagcttcagggacatagagcgaactctgggc acgagggagcgagctcaccgacaccgagtcaaaggcctggaggagcaggtatccacgctg aaggagcagctgcagcaggagatgaaacgccggcagccctccctcccatcatccttattg tcggcagggaaatga

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