Lates calcarifer (barramundi perch): 108886529
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Entry
108886529 CDS
T04895
Symbol
cacna2d3
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04260
Cardiac muscle contraction
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108886529 (cacna2d3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108886529 (cacna2d3)
04261 Adrenergic signaling in cardiomyocytes
108886529 (cacna2d3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108886529 (cacna2d3)
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108886529 (cacna2d3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
dCache_1
VWA_3
VWA_2
MCP-like_PDC_1
WAK_assoc
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
108886529
NCBI-ProteinID:
XP_050930372
UniProt:
A0AAJ8DTC9
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Position
LG12:complement(23386199..23416866)
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AA seq
1093 aa
AA seq
DB search
MQGNWRILFSHMCSTSFLLLWIFVGLNVVEVAGSQQGIPLSVVKLWASAFGGEIKSISAK
YSGSQLLQKSIQTKYKEFEKSVRVEEIDGVKLVKNLAVRMEEMFRRKAEATRRLVEAAEE
AHHQHEDNPDLQYEYFNAVLINEVDGEGNNVELGGEFILEPNDHFNNLSVNLSLSVVQVP
TNMYNKDPDIVNGVYWSEALNKVFVDNFERDPTLIWQYFGSAKGFFRQYPGVKWHPDEHG
VIGFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNII
AYNQEIHYVEPCLNGTLVRADRANKDHFREHLDKLFAKGIGLLGEALTEAFTILSDFNQT
GRGSVCSQAIMLVTDGATEMYDDVFERYNWPERKVRIFPYLIGRESAFADNLKWMACANK
GYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALSQAHKLKDKSGPSL
MTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKLIPKHMLGIHGYAFAVTNNGYILT
HPDLRPLYQEGQKRRKPNYSSVDLSEVEWEDKDGILRNAMVNRRTGTFSMEVKKTVDRGR
RVLKMHNDYYYTDIKGTPFSVGVALSRGHGKYFFRGNVSVEAGLRDLEQPDVALADEWTY
CNTEEEHEHRHLTQIQAIKLFMTGRRPHLKCDRELIQEVLFDAVVTAPLEAYWTGLALNK
SENSDKGVEIAFLGTRTGLSRTNLFVPADQLSNQDFLTAEDKEGVFNADHFPLWYKRAAE
QVPGTFIYSIPFSTALENKSVVLASTAIQLLDDRKSPIVAAVGIQMKLEFFQRKFWTACR
QCTALDGKCSISCDNEDINCYLIDNNGFILVTEEQSQTGLFFGEVEGAVMNKLLQMGSFK
RITLYDYQALCREYAGSSDSARMLSDPFSVVKWLLTELVIFLLEFNLYSWWNVDLSVKAQ
RSRGKTMMVPCDTEYPAFVSERTIKETTGNIDCEGCIRSFVIQQIPSSNLFMVVVDNKCD
CSSAPPVTMDPIEIMYNESLKCDRLKFQKDRKKPESCHPFHPEENAMECGSATRLSSPLT
AALLPLIIATISR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaaactggaggatccttttctcgcacatgtgcagcaccagcttccttctgctc
tggatcttcgtcggcttgaacgtggtggaggtggcggggtcccagcaagggatccctctg
tcagttgttaagctgtgggcctcagcatttggtggagaaattaaatccatttctgcaaaa
tattctggatcccaactactgcaaaagagcattcagactaaatataaagaatttgaaaag
tcagtcagagtggaagaaattgatggtgtgaaactggtcaaaaatctggctgtgaggatg
gaggaaatgttccggagaaaagcggaggccaccaggcggctggtggaggcagcagaagaa
gcgcaccatcagcacgaggataatcccgacctgcagtatgagtacttcaacgccgtgctg
attaatgaagtggacggggaaggaaataacgtggagctgggaggagagttcatcctggag
cccaacgatcatttcaataacctgtcagtcaacctgagcctcagtgtggtgcaggtgccc
accaacatgtacaataaagatcctgacatagtgaacggagtttactggtccgaggccttg
aataaagtatttgttgataattttgagagagaccccacactcatctggcagtactttggg
agcgccaagggtttcttcaggcagtaccctggagtgaagtggcatccagatgaacatggt
gtcattggctttgactgcagaaatcggaagtggtacatccaggcagcaacgtctccaaag
gatgtagttatcttagtcgatgttagtggaagcatgaaaggactgaggctgaccattgcc
agacagactgtctcctccatattagacacactcggagatgacgacttctttaacatcatc
gcatataatcaggagattcactacgtggagccttgtttgaatggcacgctggtccgggcc
gacagagccaataaagaccatttccgtgaacatctggacaagctgtttgctaaagggatc
gggctgctgggcgaagctctgaccgaagccttcacaatcctgagtgattttaaccagact
ggtcgtggcagtgtgtgcagccaggccataatgcttgtgactgacggggcgactgaaatg
tacgacgatgtttttgagaggtacaattggccagaaagaaaggtgcggatattcccttac
ctgattggacgagagtctgcgtttgctgataacctcaaatggatggcttgtgccaacaaa
ggatatttcagtcagatctccaccttagcagacgttcaggagaacgtgatgcggtatctt
cacgtcatgagccgcccgaaggttatcgatcacgagcacgacacggtgtggactgaagct
tacgtggacagtgctctctcccaggctcataagttgaaagacaaatcgggcccgagtctg
atgactacagtagccatgcctgtgttcagcacaaagaacgaaacgaagaaccagggtatt
ctgttgggggtcgtaggaacagacatccctctgcaggagctgatgaagctcatccccaaa
catatgttagggatccacgggtacgcattcgctgtcacaaacaatggctacatcctgaca
cacccggacctcaggcctttgtatcaggagggtcagaagaggaggaagcccaactacagc
agtgtggatctctctgaggtggagtgggaggacaaagacggcattctgcgcaacgctatg
gtgaacaggaggacagggactttctctatggaggtgaagaagacggtggacagagggagg
cgtgtcctgaagatgcacaacgactattattacactgacatcaaaggaaccccattcagt
gtcggagtggctctttccagaggtcatggaaagtacttcttcagagggaacgtgtcagtt
gaagcagggctccgtgatctggaacagccagatgtcgccctggcagatgaatggacctac
tgcaacacagaggaggagcacgagcatcgtcacctgacccagattcaagccatcaagctc
ttcatgacgggtcgcagaccgcacctcaaatgtgacagagagctgatccaggaggtttta
tttgatgctgtggtgactgctccactggaggcctactggaccggactggccctcaacaag
tcagagaactcagacaaaggagtggagattgccttcctgggaacacgcaccggcctgtcg
agaaccaacctgtttgtgcccgccgatcagctctccaatcaagatttcctgacagcggag
gacaaggagggtgtgtttaatgctgatcacttccctctgtggtacaagagagcggcagag
caggtccccggcacgtttatctactccatccccttcagcacagctttagaaaacaagagt
gtggtgttggcgagcacagctattcagctcctagatgacagaaagtctccaattgttgca
gctgtagggatccagatgaagcttgagttctttcagaggaagttctggactgcctgtaga
cagtgtacagctctggatggaaaatgcagcattagctgtgataatgaggacattaactgt
tatctcattgacaacaatggcttcattcttgtcacagaggagcaatctcagacagggctc
ttctttggagaggtggagggtgctgttatgaacaaacttctccaaatgggctccttcaaa
aggatcacgctgtatgactaccaggccctttgcagagagtacgctgggagcagtgacagt
gcgcgcatgttatcagatcctttctctgtggttaagtggctcctgacagaacttgtcatt
tttctgctggaatttaacctgtacagctggtggaacgtcgatctttccgttaaagctcag
aggtctcggggtaaaaccatgatggttccatgtgatacagaataccctgcttttgtctct
gaacgcaccattaaggaaacaacaggcaacattgactgtgaaggctgcatcaggtcgttt
gttatacagcagattcccagcagcaacctcttcatggttgttgtggacaataagtgtgac
tgcagcagtgcacctccagtaaccatggatcccatcgagatcatgtacaacgagtcacta
aaatgtgacagactgaagtttcagaaggacagaaagaaacctgaatcgtgtcatcctttc
caccctgaggaaaatgccatggagtgcggttcagcaacacgcctctccagtcctctaaca
gcagctctgctccctctgataatagcgaccatcagcaggtga
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