Lates calcarifer (barramundi perch): 108886603
Help
Entry
108886603 CDS
T04895
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X3
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108886603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108886603
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108886603
Endosome - Golgi transport
Arf GTPase associated proteins
108886603
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108886603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_1
RA
SAM_2
PH_11
PH_8
PH_3
PH_6
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
108886603
NCBI-ProteinID:
XP_018537077
UniProt:
A0A4W6F717
LinkDB
All DBs
Position
LG21:complement(8198631..8247586)
Genome browser
AA seq
1616 aa
AA seq
DB search
MLRSHTSVMSQSESFANVWDWLCVLRLEQYSDAFRSAGLATLRQCRNLTPDQLDQMGITL
PGHQRRILASLSKTQGNRDTQSETHTHPLQSERDQRTEETGHTKVLHRDRPVPVPGEEKP
VLKQREKREQETSRPTPREREKPVPKERQVSRMKEENGEGGEKKLVPEERQTAPRQRKED
RDGGVDGERERPVPKERTKFRSNAPADCPPRPHVSPTSDTSLPPVPPRSTPNCPPQRFTS
ALSPSPPARTPGSPKPDRHAVKAPAEQSVSQSSTPLSTPTHTPTQARPQTLAIQPSAQHL
VSDGGRKMSPVSPVASFSDDRNAPPLPPKAGGVPKSLPPIPQRCPAQSPRAHSPSPTKAV
ADETQKDQTPQVPPRIRTPQTQENTQQSTQPDTQPALPARKVTQPPSKFRLDSLDDNSDD
YEDPDLLNPSVHCMNTPDRDMSLQVPGQVKQRYSSLCSDDELLDDDDSTLWQDEVLRNSQ
GSVYLPNSGRLPSAIKEDSSQLTAVIKMGWLDKNPPQGALYYQRRWVKLDVDYLRYFDSD
KEIYSKGTISTAFITNVSSVGELKFEVATNNRTFIFRAESEAERNDWVTVLQDCTRGRHR
HSTMNPGSPLTPDYQGYLELKGLRSKLYTVVALDKVYLYKNIEDYRIGVGITSIEMNVGN
VKDTDRRSFDLTTPYRIFSFIAESEQLKEQWVNAMRNAIGEALSNSEVAERIWAEPSNSL
CADCGAPKPEWAAINLCVVVCKRCAGEHRGLGPSISKVRSLKMDRKVWTEELIQVFLLLG
NERVNSFWAANVPPSEALTPSSCTEERRRFITNKYRQGKYRKYHPLYGNQRELDNALCIN
VQCSDVLETLSLIFCGADVNCSTGMPNWPSPLSLATAHSQPLQAELISHNLNTELPRSVV
DMAMDTVPYAPPPCVSYNGFLFKTASMARAITERKTREEFSRRWCTLNDGTFSYYESDKN
SNPNGALKASEIVCLAVDTPERHGYENTFELYSESERLYLFGTDDGDSHKEWVKSLAKSF
IPASAEPLLRLGFERIGRLKCKDGLNLQTSKVGWFALVGSTLHAYLNDSKGEEIHLRKLN
ELSIQQDNEVLVLVEKGRTLYIEGERKLDFAGWCAAIQTAAGSGGDTLSQQQLTETDIPV
IVHSCIGYITQCGLTSEGIYRKSGVNSRVAALCERFRQDARSVRLREGEHQVDDVSNTLK
RFFRELEEGLFTSEDARTWLSTAAIQDESKKISQYQMLLNRLPRVNKATLQALINHLYCV
QRFSELNQMNLHNLAIVFGPTLFQTDGKDYTAGRAIEDLIQHYTLIFEVDEQQLKKQLEE
ITVIIQVREKLNTKFPSTEPGGHFICTVYLEEKKETAEQHVKIPGSMTAAELTCEVLDRR
NIAVKDREYWSCWEVSDKEEMERPLHYQERVLPILHSFGTDSHLLIKKHLAMEAMIVYLT
SKVDVSKHGMMKFREERSILGLGLTSGSFHDRYFILNSSSLRMYKEVRSNRPERDWPVKN
LRVYLGIKKKLRPPTCWGLTVVYESKKQERPEKQQWYLCCDTQSEMREWYATFLSIQYDG
NVWPQDGLQQTRVSRVLPDTRHGNVSLIPLRGSENEMRNSVAAFSQDPLALFRDVR
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctcacacacatcagtcatgtctcaatctgaatcttttgcgaatgtgtgggac
tggctctgtgtacttcgtctggagcagtattcagacgcatttcggagcgccggactggca
acattacggcaatgccgcaacctcacgccagatcagctggaccagatgggcatcaccctg
ccaggtcaccagagacgtatcctggctagcctgagcaaaactcagggtaatcgtgacaca
caatctgaaacacacactcaccctctacagtctgagagagatcagagaacagaagaaaca
ggacatactaaagtgttgcacagagacagacctgtgcctgtaccaggggaagaaaaacct
gtccttaagcaaagggagaaaagagaacaagagacatcgaggcctacacccagagaaaga
gagaaaccagtccctaaggagaggcaggtgtccaggatgaaagaggaaaatggagaagga
ggagagaagaagctggttcctgaagaaagacaaacagcacctaggcaaagaaaggaggat
agggatggaggagtagatggagagcgggagaggcctgtgcctaaagagaggactaagttt
cgctctaatgccccagcggactgtcccccccgcccccatgtttctccaacgtcagacacc
tctttgccccccgttcctccacgtagcacccccaactgccctccacagcgcttcacctct
gccctgagcccctcacctcctgcacgcacccctggctccccgaaaccagacagacatgcg
gttaaagccccagccgaacaaagtgtgtcccagagttcaacccctctcagcacccctacc
catacccccacacaagctcggccacagacattagccatccagccatcagcccaacatttg
gttagtgacggaggaagaaaaatgtcacctgtctctcctgttgcttcctttagcgatgac
agaaatgctccacctctccctccaaaagcagggggagtacctaaaagccttccaccaatc
ccacagcggtgtcctgcacagtctcccagagctcacagcccctctcccaccaaggcagtt
gctgatgagacgcagaaagaccaaactccacaggtcccacctcgcatcaggacaccccaa
actcaagagaacacacaacagtcgactcaacctgacactcagccggctctgcctgctagg
aaggtcacccaacctcccagtaagttcaggctggattcactcgatgataattctgatgac
tacgaggatccagacttgcttaaccccagcgttcattgtatgaacacaccagacagggat
atgtccctgcaagtgcccggtcaggtaaagcagcggtacagttctttgtgcagtgatgat
gagctgttggacgatgatgattctaccctatggcaggatgaggttctccgcaactcgcaa
ggcagtgtctacctgccaaactctgggagactaccttcagccattaaagaagacagctct
cagctcactgctgtcatcaagatgggctggctggacaagaatccacctcagggggccctt
tattaccagaggcgatgggtaaagctggatgttgactacctaagatactttgacagtgac
aaggagatatattctaaggggaccatctcaacagccttcatcaccaatgtgagcagtgtg
ggggagctcaagtttgaggtcgccacaaacaaccgaacatttatcttcagggctgaaagt
gaagctgagaggaacgactgggtgactgtactacaggactgcaccagggggcgccatcgg
cacagcaccatgaaccccggttcccctttgaccccagactatcagggctatctggagctc
aaagggttacgctccaaactttacaccgttgtcgccctagataaggtctacctctacaaa
aacatagaggactatcgtattggagttggtatcacatccattgagatgaatgtaggaaat
gttaaagacacagaccgtcggagctttgatctcaccacaccatatcgcatattcagtttc
atcgctgagtcagagcaactgaaagagcagtgggtgaacgccatgcggaatgccataggt
gaggcattgtccaatagcgaggtggcggagcggatctgggcggagcccagtaacagtctc
tgtgccgactgtggggctcccaagccggaatgggcagccatcaacttgtgcgtggtggtc
tgcaaacgatgtgcaggggagcacagaggactgggtcctagcatctcaaaggttcgtagt
ctaaagatggacaggaaagtctggacagaagagcttatacaggtgttcctgttgctaggc
aacgagcgggtaaacagtttctgggcagctaacgtcccaccaagtgaggctttgacaccc
tctagctgcactgaagaaagacggcgcttcatcaccaataaataccgccagggaaaatac
agaaagtaccaccctctgtacggaaaccagagagagctcgacaatgctctgtgtataaat
gtgcagtgcagtgatgtgctagagacattgagcctgatcttctgcggtgcagatgtaaat
tgttcaactggtatgccaaactggccttcccctctctccctggccactgcacactcacaa
cccttacaggctgagctaattagccacaatctcaacacagagctgccacgatcagtggtg
gacatggccatggacactgtaccatatgcaccaccaccttgtgtgtcttacaatgggttc
ctgttcaaaactgcatccatggctcgggctatcacagagcgcaagaccagagaggagttc
agtcgtcgctggtgcacgctaaatgatggcaccttcagctactatgagagtgacaagaac
tcaaaccccaacggagctctgaaggcttcagagatagtctgcttggctgttgacacacct
gaaagacacgggtatgagaacacctttgaactctattctgagtcagagcgtctctatctg
tttggcactgatgatggggacagccacaaagaatgggtcaagtctcttgccaagagcttt
atcccagcctctgctgaacctttgctgaggttgggttttgagcggattgggcggctgaag
tgtaaagacggcttgaacctgcaaacatccaaggttggttggtttgcgctggtgggctcc
acactccatgcctacctgaatgacagcaagggggaggagatccatctccgcaaactgaat
gaactctccatccaacaagacaatgaagtgctggttctggtggagaaaggcagaactctg
tacatagagggagagaggaagttggattttgctggctggtgtgcggccatccagacggca
gcagggagtggaggagacacgctgagccagcagcagctcacagagacagacatacctgtc
atcgttcacagctgcatcggctacatcactcagtgtggcttaacatctgagggaatttac
cgtaagagcggtgtgaattcgcgtgtggcagcactgtgcgagagatttcggcaggatgcc
cgcagtgttcgtctgagggaaggagagcaccaggtggacgacgtctccaacactctcaag
cgattcttcagggagttagaagaaggactgttcacgtcagaggatgccaggacctggctc
agcacagctgccattcaggatgaaagtaagaaaatctcccagtaccagatgctgttgaac
agactgcctcgtgtcaacaaggctacactacaagcccttatcaaccacctctattgcgtg
cagcgtttttctgagctgaaccagatgaacctccataacttggccatagtgttcggtcct
acactgttccagacagatgggaaggactacactgctggccgagccatagaggacctcata
cagcactacacgctcatctttgaggtggatgagcagcagctaaagaagcagctagaagag
atcactgttatcatccaagtccgagagaaactcaacacaaagtttcctagtactgaacct
ggagggcatttcatctgcacagtgtacctggaggaaaagaaggaaacagcagagcaacat
gttaagatcccaggttctatgacagcagcagagctgacatgtgaggttcttgaccggcgt
aacattgcagttaaagatagagagtactggagctgctgggaagtcagcgacaaggaggaa
atggaacgtccactgcactatcaggagcgagtcttacccatccttcactcctttggcact
gactcccacctgctcattaagaaacacctcgctatggaggcgatgatcgtctacctgacc
agtaaagtggacgtatccaaacatgggatgatgaaattcagagaagagcgaagcatcctg
ggacttggactgacctctggaagtttccatgaccgatatttcatcctcaattccagctcg
ctcagaatgtacaaggaagtcagaagtaaccgtccagaacgtgattggccagtgaagaat
ctaagggtttacctaggtatcaagaaaaagctccgtcctcccacatgctggggactgaca
gtggtgtatgagagtaagaaacaagagagaccagagaaacagcagtggtatctctgctgt
gacacccagtcagaaatgagggagtggtacgctacttttctcagtatccagtacgacggc
aacgtgtggcctcaggatggactccagcagacacgagtgagccgcgtgttgccagataca
cgtcacggtaacgtgtcactgataccgcttcgtggcagtgagaatgagatgcggaacagc
gtagcagctttcagccaagacccgcttgctctctttagagatgttcgataa
DBGET
integrated database retrieval system
