Lates calcarifer (barramundi perch): 108886629
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Entry
108886629 CDS
T04895
Symbol
gria4a
Name
(RefSeq) glutamate receptor 4a isoform X3
KO
K05200
glutamate receptor 4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108886629 (gria4a)
04082 Neuroactive ligand signaling
108886629 (gria4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108886629 (gria4a)
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Glutamate (ionotropic)
108886629 (gria4a)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
108886629
NCBI-ProteinID:
XP_018537121
UniProt:
A0AAJ7PS16
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Position
LG21:8883483..8977471
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AA seq
888 aa
AA seq
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MRIIIFSWHFLGVYSALWGLATGAFPSSVQIGGLFIRNTDQEYTAFRLAIFLHNTSPNAT
EAPFNLVPHVDNIETANSFAVTNAFCSQYSRGVFAIFGLYDKRSVNTLTSFCGALHISLV
TPSFPTEGEGQFTLQLRPSIRGALLSLLDHYDWSRFVFLYDTDRGYAILQAIMERAGQNG
WQVSAICVESFNEAAYRRLLEDLDRRQERKYVIDLEPERLQSILEQAVSVGKHVKGYHYI
IANLGFKDISLERFMHGGANVTGFQLVDFSKPIVIKLMQRWNKLDQREYPGSESPPKYTS
SLTYDGVLVMAEAFRTLRRQKIDISRRGNAGDCLANPAAPWNQGIDMERALKQVRIQGLT
GNIQFDHYGRRVNYTMDVFELKSNGPRKIGYWNDIDKLVLVQNENALSNDSSAMENRTVV
VTTIMEGPYVMLKKNWELYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGKYGARDPE
TKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFS
FLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHAEEPEEGATEQGPTDQPPNEFGIF
NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIE
SAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPTVFTKTTAEGVARVR
KSKGKYAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGIATPKGSQLRNAVNLAVLKLN
EQGLLDKLKNKWWYDKGECGSGGGDSKDKSSQALSLSNVAGVFYILVGGLGLAMLVALVE
FCYKSRAEAKRMKVDLSPPHCPSPSPSTQNLATYREGYNVYGSEGVKI
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaggattattattttttcttggcactttctcggggtgtattccgccctttgggggctg
gcgacgggggctttccccagctcagtgcagataggtgggttgttcattaggaatactgat
caggagtatacagcgtttcgactagctatcttccttcacaacaccagccctaatgctacg
gaagctccctttaacctggtgccgcatgttgacaacatagagaccgccaacagcttcgct
gtcaccaacgcattctgttctcagtattcaaggggggtctttgccatcttcggcctttac
gacaagcgttcagtgaacacgctgacgtccttctgcggggccctgcacatcagccttgtg
acgcccagcttccccactgaaggagagggccagttcaccctgcagctccggccgtccatc
agaggggctttgctatcactgttggaccactacgactggagccgatttgtcttcctctac
gacacagatagaggttatgcaatactgcaggcaattatggagagagcagggcagaacgga
tggcaggtgagtgcaatctgtgtggagagtttcaatgaggcagcgtatcgccgactccta
gaggacctggatcgacgtcaggagaggaaatatgtcattgacctggagcctgagcgacta
cagagcatcctagaacaggctgtcagtgtggggaaacatgtaaaaggctaccattacatc
atagcaaacctgggtttcaaggacatctctctggagaggttcatgcatggcggggcgaac
gtgacgggtttccagctggtggacttcagcaagcctatagttattaaactgatgcagcgc
tggaacaaactagatcagagggagtaccctggatctgagagcccacctaagtatacctcg
tctctaacatacgatggtgtccttgtgatggctgaggccttccgtacccttcgccgtcag
aaaattgatatcagtcgccgtggtaacgctggtgactgcctggccaatccagctgctcca
tggaaccaaggaatagatatggagcgtgcactcaaacaggtgcgcattcagggcctgact
gggaacattcagtttgatcactacggtcggagggtcaactacaccatggacgtgtttgaa
ctgaagagcaacggaccacgcaagattggctactggaacgacatagacaaacttgtgttg
gtccagaatgaaaatgcactgtctaatgacagctcagcgatggagaaccggactgtagtc
gtgaccaccatcatggagggtccctatgtgatgctgaagaagaactgggagctttacgag
ggcaacgaccagtatgagggatactgtgtggacttagcttcggagattgccaaacacatc
ggaatcaaatacaagatctccattgtaccagatgggaaatatggagccagagatccagag
acgaaaatatggaatggcatggttggagagcttgtgtatgggaaagcagaaatcgctgtg
gccccactgaccatcaccctggtgagagaagaggtgatcgacttctcgaaacccttcatg
tctctgggtatttccatcatgatcaagaagccccagaagtctaaaccgggtgttttctct
ttcctggacccgctggcctacgagatctggatgtgcatagtgtttgcttacattggagtc
agtgttgtgctgtttttggtgagtcgcttcagtccgtacgagtggcatgcagaggagccg
gaggagggtgccacggagcagggtcccactgaccagcctcccaacgagtttggcatcttc
aactccctctggttctcgctgggagctttcatgcaacagggctgcgacatctcgccccgg
tctctgtctggccgtatcgttggaggtgtgtggtggttcttcacccttatcatcatctcc
tcttacacagccaacctggctgccttcctcactgtcgagaggatggtctcacccatagag
agtgcagaggacttggccaaacagacagagatagcctacgggacactggactcaggctct
accaaggagttcttccggaggtcaaaaatagccgtatacgagaagatgtggtcatatatg
aagtctgctgagccaactgtcttcaccaaaaccacggcggagggcgtggcgagggtccgc
aagtccaaggggaagtacgccttcctcctggagtccaccatgaacgaatacacggagcag
cgcaagccttgtgacaccatgaaagtcggggggaacctggactccaaaggatatggcatt
gctacaccgaaaggctcacagttaagaaacgcggtcaacctggccgtgctaaagctcaac
gagcagggcctgttggacaaattgaaaaacaagtggtggtatgacaaaggagaatgtggc
agcgggggaggggattccaaggacaagtcgtcccaggctctgagcctgtccaatgtggct
ggggtcttctacatccttgtgggcggcctgggcctggccatgctggtggccctggtcgag
ttctgctacaagtcacgggccgaagcaaagcgcatgaaggtggaccttagccccccccac
tgccccagcccctcccccagcacccagaatctagccacttatagggaggggtacaacgtg
tacggctccgagggggtcaagatatag
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