Lates calcarifer (barramundi perch): 108886658
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Entry
108886658 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108886658
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108886658
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108886658
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108886658
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108886658
03036 Chromosome and associated proteins [BR:
lcf03036
]
108886658
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108886658
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108886658
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108886658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
108886658
NCBI-ProteinID:
XP_018537148
UniProt:
A0AAJ7PS29
LinkDB
All DBs
Position
Unknown
AA seq
226 aa
AA seq
DB search
MEELTEVITAAEFHPHQCNTFVYSSSKGTIRLCDMRVSALCDKHSKLFEEPEDPSNRSFF
SEIISSISDVKFSHNGRYMMTRDYLSVKIWDLNMENRPVETYQVHEYLRSKLCSLYENDC
IFDKFECCWNGNDSVVMTGSYNNFFRMFDRGHRRDVTLEASRENSKPMQVLKPRKVCAGG
KRKKDEISVDSLDFNKKILHTAWHPXDNIIAVATTNNLYIFQDKVN
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctaacagaggtgatcacagcagcagagttccatccgcatcagtgtaatacc
tttgtctacagcagcagcaaaggaaccattcgtctgtgtgacatgagggtttcagcacta
tgtgacaagcactccaaattgtttgaggagccagaagatcccagtaatcgctccttcttc
tctgagatcatatcctcaatctcagatgttaagtttagccacaatggacgctacatgatg
accagagactacttgtctgtgaagatttgggacctgaacatggagaacaggccagtggag
acctatcaggttcatgaatacctgaggagcaagctgtgctcgctctacgagaatgactgc
atctttgacaagtttgaatgctgctggaatggcaatgacagtgtggtgatgactggctca
tataacaacttcttccggatgtttgaccgtggccataggcgggatgtaaccttggaggcg
tcccgagaaaacagtaagcccatgcaggtcctaaagccccgcaaagtgtgcgcaggtggc
aagcgcaagaaggatgaaatcagcgtagacagtttggacttcaacaagaagatccttcat
actgcctggcatcccnaggacaacatcattgcagtggcgacgaccaacaacctctacata
ttccaggataaagtgaactaa
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