Lates calcarifer (barramundi perch): 108886678
Help
Entry
108886678 CDS
T04895
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108886678
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
108886678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
108886678
NCBI-ProteinID:
XP_018537168
UniProt:
A0A4W6FCL4
LinkDB
All DBs
Position
LG19:19990966..19999588
Genome browser
AA seq
677 aa
AA seq
DB search
MVNVKKRKGRVVIDSDSEDSASDDNLDQELLSLAKRKRVDSGEQEEPVSNPAASTDSETS
DSDDEWTVGGTKGKKKVKPGKGSEKKNATKKKVNKATASGSSDGDSSAESSAPEEGEVSD
SESNSSSSSSDSDSSEDEVFRDGYDDDLMGDAEDRARLEQMTEKEREQELFNRIEKREVL
KRRFEIKKKLKTAKKKEKEEKKKKQEEEQEKRKQSQVQDTQVVMSHNKERRSKRDEKLDK
KSQAMEELKAEREKKKNKTAELLAKRQPLKTSEVYSDDEEEEEEDDDKSSVKSDRSSRSS
SYDDDEKEETPPKSQPVSLPDELNRIRLSRNKLERWCHMPFFAKTVTGCFVRIGIGNSSS
KPVYRVAEIVDVVETAKVYQLGSTRTNKGLQLRHGGDTRVFRLEFVSNQEFTESEFMKWK
EAMMVAGMQVPTLDEITKKEQSIKEALNYKFNDKDIEDIVKEKDRFRKAPPNYAMKKTQL
LKDKAMAEESGDGEKVKVIQDELNELEERAEALDRQRTKNISAISYINQRNRSWNIVESE
KALVAEGQNAKNQQMDPFTRRQCKPTMVSNARDPSVHAAILAHLNQKYGSGSTPDPSSAE
KNKLGQTNSKDKDVPKPTTDLSEDLFKVHDFDVKIDLQVPNAEAKSLSVSSNALPVKDGA
PRRSLNLEDYKKRRGLI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgtaaagaagcggaaaggtcgagtcgtgatcgactcggactccgaagacagt
gctagcgacgataatttagatcaggagctgttatcgttggcaaagaggaagagggttgat
tcaggtgaacaggaagagcctgttagcaatcctgctgcttctacagactctgagacatct
gacagtgacgatgagtggactgtgggtggcaccaaaggcaaaaagaaagttaagccaggg
aaaggttctgagaagaagaacgctacaaagaagaaggttaataaagcaacggcatctggc
agctctgatggagacagctcggctgagagctctgcaccagaggagggtgaggtgtctgat
tcagagagcaacagttcatcctccagctcagactcggactcctctgaggacgaggtgttc
agggacggttatgacgatgacttgatgggagacgcggaggacagagctcgtctggagcag
atgacagagaaggagagagagcaggagctgttcaaccgaattgagaaaagagaggtgcta
aagagacggtttgaaattaagaagaagctgaagacggcaaagaagaaagagaaagaggag
aagaagaagaagcaggaggaagaacaagaaaaaaggaagcaatctcaggttcaagacaca
caagtggtcatgtcacacaacaaggagagacgatccaaacgtgatgaaaaacttgacaaa
aagtcccaggccatggaagaactcaaagctgaacgtgagaagaagaaaaacaaaacagct
gaactgctcgccaaacgtcagcccctgaagacgagcgaggtttattctgatgatgaggag
gaagaggaggaagacgatgacaagtcatcagttaaaagtgatcggagttcgcgttcatcg
tcttatgatgatgatgaaaaagaggagactccaccaaagtcgcagccagtttcactacca
gatgagctgaacaggatccgcctgtccagaaacaagctggagcgctggtgccacatgccc
ttctttgctaagactgtgactggctgctttgtgaggatagggatcgggaacagcagcagt
aaaccagtttatagggttgctgaaattgtggatgtggtagagacggcgaaggtttaccaa
cttggatcaacgcgaacaaacaagggactgcagttaaggcatggcggggacacacgggtt
ttcaggcttgagtttgtatcaaatcaggagtttacagaaagcgagtttatgaagtggaaa
gaggcgatgatggttgctgggatgcaagtcccaactcttgacgaaatcaccaaaaaggag
cagtccatcaaagaagctctgaactacaagttcaatgacaaagacatagaggatattgtt
aaagagaaggacagattccgaaaagcaccaccgaattatgccatgaagaaaacacagcta
ctcaaagataaggccatggcagaagagagtggagacggtgagaaagtgaaagtgatccag
gatgagctaaatgaactcgaggaaagggcagaagcactcgacagacagaggaccaagaac
atctctgccatcagctacattaatcagaggaacagaagctggaatatcgttgaatctgag
aaagctcttgtggctgaaggacaaaatgccaaaaaccaacaaatggaccctttcacacga
agacagtgcaaacccaccatggtgtcaaatgccagagacccgtcagtccatgcagctatt
cttgctcatctcaaccagaagtacggctctgggtcgacaccagatccttccagtgctgaa
aagaacaaactgggacaaacaaactcaaaagacaaagatgtccccaaaccaaccactgac
ctctcagaggacttgtttaaagttcatgattttgacgtcaagatagacctacaggttccc
aatgcagaagcaaagtctctgtccgtgagctccaatgcgctgccagtgaaggacggcgct
ccacgcaggtccctcaacctggaggactacaagaagaggagggggctgatctaa
DBGET
integrated database retrieval system
