Lates calcarifer (barramundi perch): 108886695 Help Entry 108886695         CDS       T04895                                  Symbol actn1 Name (RefSeq) alpha-actinin-1 isoform X1   KO K05699   actinin alpha 1/4 Organism lcf  Lates calcarifer (barramundi perch) Pathway lcf04510   Focal adhesion lcf04517   IgSF CAM signaling lcf04518   Integrin signaling lcf04519   Cadherin signaling lcf04520   Adherens junction lcf04530   Tight junction lcf04810   Regulation of actin cytoskeleton Brite KEGG Orthology (KO) [BR:lcf00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     108886695 (actn1)    04518 Integrin signaling     108886695 (actn1)    04519 Cadherin signaling     108886695 (actn1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     108886695 (actn1)    04520 Adherens junction     108886695 (actn1)    04530 Tight junction     108886695 (actn1)   09142 Cell motility    04810 Regulation of actin cytoskeleton     108886695 (actn1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lcf04131]     108886695 (actn1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:lcf04812]     108886695 (actn1)    04147 Exosome [BR:lcf04147]     108886695 (actn1) Membrane trafficking [BR:lcf04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     108886695 (actn1) Cytoskeleton proteins [BR:lcf04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      108886695 (actn1) Exosome [BR:lcf04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    108886695 (actn1)   Exosomal proteins of colorectal cancer cells    108886695 (actn1)   Exosomal proteins of bladder cancer cells    108886695 (actn1) SSDB OrthologParalogGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7 EF-hand_5 XisI Motif Other DBs NCBI-GeneID:  108886695 NCBI-ProteinID:  XP_018537199 UniProt:  A0A4W6FFC7 LinkDB All DBs Position LG19:19718193..19771343 Genome browser AA seq 890 aa AA seqDB search MDQYDGDNDYMQQEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDG LKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNAKM TLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCAL IHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYV SSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRMP ENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVS DINNAWGNLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTEGKEDMLQKRDY ETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQRICDQ WDTLGALTQKRSEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFIVHTIE EIQGLSTAHEQFKATLPEADKERLAILGIHNEIAKIVQTYHVNMAGTNPYTTINPQEINA KWDKVRQLVPQRDQALIEEHARQQNNERLRRQFANQANVIGPWIQTKMEEIGRISIEMHG TLEDQLTHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLT TIARTINEIENQILTRDAKGISQDQLNEFRASFNHFDRDHSGTLGAEEFKACLISLGFDI ANDAQGENEFSRIMSIVDPNRMGIVTFQAFIDFMSRETADTDTADQVMASFKVLAGDKNY ILADELRRELPPDQAEYCIARMAPYTGPDAVPGALDYMSFSTALYGESDL NT seq 2673 nt NT seq  +upstreamnt  +downstreamnt atggatcaatatgatggagacaatgattacatgcagcaggaagatgactgggatcgggat ctcctcttggatcctgcatgggagaagcagcagagaaagacatttacagcttggtgtaac tctcacctgaggaaagcaggcacgcagatcgagaacattgaggaggacttccgggatgga ctgaaactcatgctgctgcttgaggtcatctcaggcgaacgcttggccaaaccagagaga ggcaagatgagagtccacaagatctccaacgttaacaaagcgctcgacttcatcgccagc aaaggagtgaagctggtgtctatcggtgcagaggagatcgtagatggcaatgctaagatg accctgggaatgatctggaccataatcctccgctttgccatccaagacatttctgtggaa gagacatctgccaaagagggcctcctgttgtggtgccagaggaagactgcgccctacaag aatgtcaacatccaaaactttcacatcagctggaaagatggtttgggtttctgtgcactc attcatcgacaccgtccagagctcattgactatggaaaactgcgcaaggatgaccccatg accaacctgaacacagccttcgacgtggcagagaagtacctggacatccccaagatgttg gacgcagaagacattgtgggcactgcccgtccggacgagaaggcgatcatgacctacgtc tctagcttctaccacgccttctcaggcgcccagaaggcagagacagcggccaacaggatc tgcaaggtgctggctgtcaaccaagagaatgagcagctgatggaggactatgagaagctg gccagtgatctgctggagtggatccgtcgcactattccctggctggagaaccgcatgccg gagaacaccatgcaagccatgcagcagaagctggaggacttcagagactaccgccgcctc cacaagccgcccaaagtgcaggagaagtgccagctggagatcaacttcaacaccctgcag accaagctgaggctcagcaacaggcctgccttcatgccctcagagggaaagatggtctcg gatattaacaatgcgtggggaaatctagagggagcagagaagggctatgaagagtggctt ctaaatgagattcgcaggctggaaagactcgaccacctggcggagaagttccgccagaaa gcagctattcacgaagcttggactgaaggtaaggaggacatgctgcagaaacgtgactac gagacggcctctctgtcagagatcaaggccctgctgaagaaacacgaggccttcgagagc gacctggctgcacatcaggaccgtgtggagcagatcgcagccatcgcacaggagttaaat gagctggactactacgactcccccagtgtaaacgctcgctgccagcggatctgtgaccag tgggacacactgggagccctgacccagaaacgtagtgaggctttgcagagaactgagaag ctgcttgaaaccatcgaccaactgtaccttgagtttgccaaaagagcggctccattcaac aactggatggagggcgccatggaggacctgcaggacacctttatcgtccacaccatcgaa gaaatccagggattaagcacagcccacgagcagttcaaagccacgctgcctgaggcggac aaagagcgcctggccatcctgggcatccacaatgagattgccaagattgtgcagacctat catgtgaacatggctggcaccaacccctacaccaccatcaacccacaggagattaacgcc aaatgggacaaggtcaggcagctggtgccccagcgcgaccaggctctgatcgaggagcac gcccggcagcagaacaacgagcgtctgcgcagacagtttgccaaccaggccaatgtcatc gggccctggatccagaccaagatggaggaaattggccgcatctcaatcgagatgcacggc accctggaggaccagctgacacacctacgccagtacgagaagagcatcgtcaactacaag ccaaagatcgaccagctggagggagaccaccagctcattcaggaagctctcatctttgac aacaagcacaccaactacaccatggagcacatccgcgtaggctgggagcagctactcacc accatcgcccgcaccatcaatgaaatcgagaaccagatcttgacgcgagacgccaagggc atcagccaggaccagctgaacgagttccgggcttccttcaaccacttcgacagggaccac tcgggcactctgggcgcggaggagttcaaggcctgcctgatcagcctgggcttcgatatc gccaacgatgcacagggtgaaaacgagttctcccgcatcatgagcatagtggaccccaac aggatgggcatcgtcaccttccaggccttcatcgacttcatgtcccgcgagacggccgac acagacactgccgaccaagtgatggcctccttcaaagttctggcaggggataagaactac attttggccgatgagctgcgccgggagctgcctccagaccaagctgagtactgcatcgcc cgcatggccccctacaccggccccgatgccgtgccaggagccctcgactacatgtcgttc tctaccgctctgtacggagagagcgacctctga

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