KEGG   Lates calcarifer (barramundi perch): 108886701
Entry
108886701         CDS       T04895                                 
Name
(RefSeq) atlastin-1 isoform X1
  KO
K17339  atlastin [EC:3.6.5.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108886701
Membrane trafficking [BR:lcf04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    108886701
 Autophagy
  ER-phagy
   ER-phagy recepters
    108886701
SSDB
Motif
Pfam: GBP GBP_C FA_desaturase DUF2207_C
Other DBs
NCBI-GeneID: 108886701
NCBI-ProteinID: XP_018537212
UniProt: A0AAJ7PS77
LinkDB
Position
LG19:complement(19470728..19481966)
AA seq 562 aa
MSKHRKDRDSWGEWSLSDKNVYDWSSEEEEPDGRARPVQVLLVKDDHTFELDEAALSRIL
LAEEVRDRDVVAISVAGAFRKGKSFLMDFMLRYMYNHASEDWLGKAEEPLTGFSWRGGSE
RETTGIQIWSEVFLVDKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYN
ISQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFPYGQEGGMKFLE
KRLKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPHFDGRIKEIDGEFINNL
KVLVPWLLSPRNIDVKEINGSKITCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNL
AAVAAAKDLYNKKMEEVCGGDRPFLAPSELQARHSVIREEALQVFRGVKKMGGEEFSRRY
LQQLEGEIDEVFVQYIKHNDSKNIFHAARTPATLFVVIFVMYVAAGITGFVGVDIIASLC
NMILGLALITLCTWAYIRYSGEYRELGAVIDQVAGALWDQGSTNEALYKLYNVAANHRHL
YHHAFPGPQVDEVAEEQDKKRD
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgtcgaagcaccgtaaagacagagacagctggggtgagtggtccctcagtgacaaaaat
gtctatgactggagctcggaggaggaggagccggacggacgagcccggcccgtgcaggtg
ctgctggtcaaagacgaccacaccttcgagctggacgaggcggcgctgagtcgcatcctg
ctggcggaggaggtcagagaccgcgacgtggtggccatctctgtggctggggctttccgc
aagggcaagtccttcctcatggacttcatgctgcggtacatgtacaaccatgcgtctgag
gactggctcgggaaagctgaagagcctctgactggcttctcctggaggggtggctcagaa
agggagaccaccgggatacagatctggagcgaggtcttcctggtggacaagccagatgga
aaaaaggttgctgtattgctaatggacacacagggcacgtttgacagccagtcgacgctg
agggattcagccactgtgttcgctctcagcaccatgataagctcaatgcaggtttacaac
atctcacagaatgtacaagaggacgaccttcagcatttgcagcttttcactgagtatggc
agactagcgatggaggagacgttcctcaaaccgttccagtccatgattttccttgttcga
gactggagttttccatacgagtttccctacggacaagaaggaggcatgaagttccttgag
aagagactgaagatctcagagaaccagcacgaagagctgcaaaacgtccgtaaacacatc
cactcctgcttcaccaacatctcctgtttcctgatgcctcaccccggcctcaaagtggcc
actaacccacactttgacggaagaattaaagagatcgatggtgagttcataaacaacctg
aaggttctggtcccgtggctcctcagtcctcgtaacatcgacgtgaaggagatcaacggc
agcaaaatcacctgcagaggcctggtggaatacttcaaggcctacatcaaaatctaccaa
ggtgaagagctgccacatccaaaatctatgctgcaggccacagcagaggcgaataacttg
gcagcagtcgcagctgcaaaggatctgtacaacaagaaaatggaggaggtctgcggtggc
gaccggcccttcctggcccccagcgagctgcaggcccggcacagcgtcatcagagaggag
gccctgcaggtgttccgcggcgtgaagaagatgggcggcgaggagttcagccgccgctac
ctgcagcagctggagggagagatcgacgaggtcttcgtccagtacatcaagcacaatgac
tccaagaacattttccacgcagcccgcacgccggccaccctgttcgtggtcatctttgtc
atgtacgtggctgcgggcatcacaggctttgtgggcgtggatatcattgccagcttgtgc
aacatgatcctgggtctggcactgatcactctctgcacctgggcctacatccggtactcc
ggggaataccgagaactcggcgccgtcatcgaccaggtggctggtgctctgtgggaccag
gggagcacgaatgaggctctctacaagctgtacaatgtagcggccaatcacaggcacctg
taccaccacgccttccctgggcctcaggtggacgaggtcgcggaggagcaggacaagaag
agggactga

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