Lates calcarifer (barramundi perch): 108886701
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Entry
108886701 CDS
T04895
Name
(RefSeq) atlastin-1 isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108886701
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108886701
Autophagy
ER-phagy
ER-phagy recepters
108886701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
FA_desaturase
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
108886701
NCBI-ProteinID:
XP_018537212
UniProt:
A0AAJ7PS77
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Position
LG19:complement(19470728..19481966)
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AA seq
562 aa
AA seq
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MSKHRKDRDSWGEWSLSDKNVYDWSSEEEEPDGRARPVQVLLVKDDHTFELDEAALSRIL
LAEEVRDRDVVAISVAGAFRKGKSFLMDFMLRYMYNHASEDWLGKAEEPLTGFSWRGGSE
RETTGIQIWSEVFLVDKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYN
ISQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFPYGQEGGMKFLE
KRLKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPHFDGRIKEIDGEFINNL
KVLVPWLLSPRNIDVKEINGSKITCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNL
AAVAAAKDLYNKKMEEVCGGDRPFLAPSELQARHSVIREEALQVFRGVKKMGGEEFSRRY
LQQLEGEIDEVFVQYIKHNDSKNIFHAARTPATLFVVIFVMYVAAGITGFVGVDIIASLC
NMILGLALITLCTWAYIRYSGEYRELGAVIDQVAGALWDQGSTNEALYKLYNVAANHRHL
YHHAFPGPQVDEVAEEQDKKRD
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcaccgtaaagacagagacagctggggtgagtggtccctcagtgacaaaaat
gtctatgactggagctcggaggaggaggagccggacggacgagcccggcccgtgcaggtg
ctgctggtcaaagacgaccacaccttcgagctggacgaggcggcgctgagtcgcatcctg
ctggcggaggaggtcagagaccgcgacgtggtggccatctctgtggctggggctttccgc
aagggcaagtccttcctcatggacttcatgctgcggtacatgtacaaccatgcgtctgag
gactggctcgggaaagctgaagagcctctgactggcttctcctggaggggtggctcagaa
agggagaccaccgggatacagatctggagcgaggtcttcctggtggacaagccagatgga
aaaaaggttgctgtattgctaatggacacacagggcacgtttgacagccagtcgacgctg
agggattcagccactgtgttcgctctcagcaccatgataagctcaatgcaggtttacaac
atctcacagaatgtacaagaggacgaccttcagcatttgcagcttttcactgagtatggc
agactagcgatggaggagacgttcctcaaaccgttccagtccatgattttccttgttcga
gactggagttttccatacgagtttccctacggacaagaaggaggcatgaagttccttgag
aagagactgaagatctcagagaaccagcacgaagagctgcaaaacgtccgtaaacacatc
cactcctgcttcaccaacatctcctgtttcctgatgcctcaccccggcctcaaagtggcc
actaacccacactttgacggaagaattaaagagatcgatggtgagttcataaacaacctg
aaggttctggtcccgtggctcctcagtcctcgtaacatcgacgtgaaggagatcaacggc
agcaaaatcacctgcagaggcctggtggaatacttcaaggcctacatcaaaatctaccaa
ggtgaagagctgccacatccaaaatctatgctgcaggccacagcagaggcgaataacttg
gcagcagtcgcagctgcaaaggatctgtacaacaagaaaatggaggaggtctgcggtggc
gaccggcccttcctggcccccagcgagctgcaggcccggcacagcgtcatcagagaggag
gccctgcaggtgttccgcggcgtgaagaagatgggcggcgaggagttcagccgccgctac
ctgcagcagctggagggagagatcgacgaggtcttcgtccagtacatcaagcacaatgac
tccaagaacattttccacgcagcccgcacgccggccaccctgttcgtggtcatctttgtc
atgtacgtggctgcgggcatcacaggctttgtgggcgtggatatcattgccagcttgtgc
aacatgatcctgggtctggcactgatcactctctgcacctgggcctacatccggtactcc
ggggaataccgagaactcggcgccgtcatcgaccaggtggctggtgctctgtgggaccag
gggagcacgaatgaggctctctacaagctgtacaatgtagcggccaatcacaggcacctg
taccaccacgccttccctgggcctcaggtggacgaggtcgcggaggagcaggacaagaag
agggactga
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