Lates calcarifer (barramundi perch): 108886727
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Entry
108886727 CDS
T04895
Symbol
hivep2b
Name
(RefSeq) transcription factor HIVEP2
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108886727 (hivep2b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108886727 (hivep2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_16
zf-met
TFIIIA_zf-C2H2
zf-H2C2_5
DUF4320
Motif
Other DBs
NCBI-GeneID:
108886727
NCBI-ProteinID:
XP_018537241
UniProt:
A0A4W6FRV8
LinkDB
All DBs
Position
LG19:19207546..19220828
Genome browser
AA seq
1835 aa
AA seq
DB search
MESLETTAGVKSSTDGHDRNVAQKKCTSEAAQARRSPSVELEGKGWHQQLQEGQSRDTCG
FKEMSDSGKSLQLEDQQSQTQSTSHPDYEVSSYPLQSTKPFPIGRQKAVGHLVSAQSPGP
ASHRKSPSSPEVQQCSHSGMDQLSETVCKVEQKPQKPGKYVCDYCGRACAKPSVLKKHIR
SHTGERPYPCVPCGFSFKTKSNLYKHRKSHAHSVKAGTVPFSELGPYNANTDQGSFEGEG
ELFSDAEQSTDTDEDTLNDPLLLLDSPVEGSDNTAVKVLNLIAQKKGATSMSAQDGSSQP
QEINAPPAAAEASRAIQSCTIKQRLALRLSEKRSSDSDHNLSLPSQSSKGSTDSGYFSRS
ESAEHQTGPPNTNAKSYQEIMFGKCYRPSPKQTTAFVACSTDSGEYTGKRSEKGVSRVFT
QEKDTVESIKINTKSFTREEVKEPQLDAGSDVGPLIRSNSMPTSSAVCLTMPQALRGSHS
FDERTSTGGMRRLRRQAAFELSAHDGHADTDSHVKMSECGISPSGLEMENYPSMASNMSH
QRHAMELATRKRRKEKREEEDLPGQYEGHHEQCEEMFDPSKDYDSKQAALGIMALGKGHS
SSMLTQMDRCDMDISVSPEISGRKTLGNVISVIQHTNSINRPHSEQSESFKYHGQRQESI
SSFQAMETSESYEIERSDSRLRQSFQMGPKLVRQPNIQVPEIRVTVEPDSPEKAPEVQVK
EQEKHVEEFQWPQRSETLAQFPPEKLPPKKKRLRLADIEHSSGESSFESACTSLSRSPSQ
DSNLSYSSTFSFDREDSLKSVSPARQDEFGKPLELLAVPGSGHSLSVLNQRQQHEMRRSS
SEQAPCNLRKEFPEVRSISFDYGSLSPTSKVRHVDISAGHFAAKERRRGNLVRQESLNMD
TEVTQVPSQVFPQYLSSTSPPFTTVAVLPQTLPIFSTGNTFPQLSHPSLLVPVRIQTHVP
SYGSITYTSVSQIFDNQYDSVSSTTATSKHHTSRLSGNLDSHNVLSYNRPPSTHTLNVEA
LDLSSAKLKTGIPLSLTSRTISTTNASSGGANKRMLSPASSLDLFMEVKQQKRVKEERMF
GQIVEELSAVELGKCNLSEEKGHRSEMQGASTPDSRRSKFITLQQKVTEATDHGVESAME
SSSLETSSPPYSMISVREVKEAGMEKRVQMDMVAQLVTSQDILISDAEHSRLLSQFPSLR
TTTGVSWCYLNYTKPSCSHSNSPLSSVYTTWCVSSHNPNPLELSTSTALALLRSRQRGDK
VIYTVAAMCQPGTGKLVSSLILWRQTMEQLQRKPEPKEVDITYGKKVKDIGCRVKTAKEE
WKEREASTTQTVPTRIKIFEGGYKSNEDYVYVRGRGRGKYICEECGIRCKKPSMLKKHIR
THTDVRPYICRVCNFAFKTKGNLTKHMKSKAHMKKCLELGVSVTMDDTEIQEHVDDIQQE
SKTEVAVTTKHQFSDADESDGMDEEADEIDEEDDEDDEYEGDSTPKLRSRSTSPQPCGVT
SLSVTATAAIHGCSLTSLPGTDIRQQPSGRRTGLDHRPVLATDQREKSVDEDSLTMLSPD
QTSFLFDPYSSCLLSPGWESPIREPSPSRLRYPSPRRELSPRGRSSPRWDTSPLRPGSPS
FTPIQHLSPISIERPMSPGSELAGKRESSIRGRQRVVLRAVSPRRGSHQHKGSGDKTRHQ
AKMEMAQLQGAFEMEMDQRSSLASTLPGVASSHHQNILSHLPLHSQQQAHSLLPVVPVGG
LQMLHSPPSSSTDVTSSSALSPQSSEGQRCSSREGSVHGLETGGEDIRGQNQLSSHQAAQ
EKSLNPGVRDSRQEENVQTCLKAIASLKITTEDPH
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggagtcactggaaactacagcaggggtgaagagctccacagacggtcatgacagaaat
gttgcacagaaaaaatgcacatcagaggccgcacaggctaggaggagtccatcagtcgaa
ctggaaggcaaggggtggcaccaacaactccaagaaggtcagagcagagacacatgtggt
ttcaaggaaatgtctgactcagggaaatcactgcaattagaagatcagcaatcccaaacc
caatccacaagccatccagactatgaggtgtcttcatatccgttacagtccacaaaacca
tttcccattggcagacagaaagctgtaggccacttggtttctgcacagtccccaggacct
gcatctcacaggaagtcccccagttcacctgaagtccaacagtgttcccattcagggatg
gatcagctgtcagagactgtgtgtaaggtggaacagaaaccacaaaagcctgggaagtat
gtttgtgattactgtggaagggcatgtgccaaacccagtgtgcttaagaaacatattcgc
tcacacactggggaacggccctatccgtgtgtcccctgcggattctcctttaaaaccaag
agtaatttatacaaacacagaaagtcccacgctcactcggtcaaagctggaacagtgcca
ttctcagaacttggtccttacaatgccaatacagaccaggggtcttttgaaggggaagga
gagttattctctgatgctgagcaaagcacggacacggacgaggacactcttaacgacccg
ctgctgttgttggactctccagtggaaggatcagataacactgctgtaaaagtactaaat
ctcattgctcagaaaaagggagctacgtcgatgtcagctcaggatggttcatcccagccc
caagaaatcaatgcacctcctgctgctgccgaggctagccgtgcaattcaatcttgcact
atcaaacagaggcttgcacttcgcctgtctgaaaaaagaagcagtgactctgaccacaat
ctgtcccttccaagtcagtcgagcaagggcagcacggactctggctacttctcgcgatcc
gagagtgccgagcaccagaccggtcctccgaacaccaacgcaaagtcctatcaagaaatc
atgtttgggaagtgttacaggccaagccctaaacagacaacggcttttgtggcctgcagc
acagactcgggtgaatataccgggaaacgctcagaaaaaggtgtttcccgtgttttcacc
caggagaaagacactgttgagtcaatcaaaataaacacaaagtcattcacgagggaggaa
gtaaaagaaccccagttagacgctggctctgatgtggggcctctgatcagaagcaactca
atgccaacatcctcagcagtgtgtctgactatgcctcaagccctcagaggcagccactcg
tttgatgagagaacaagcaccgggggcatgaggagactcaggcggcaagctgctttcgaa
ctctccgcacatgacgggcatgcagatacggacagccatgtaaagatgagcgaatgtggc
atttcaccctcaggattggaaatggaaaattacccctctatggcatcgaatatgagccat
cagaggcatgcaatggaactggcaacacggaagcgtcggaaagagaagagggaggaggag
gatttgcctggtcaatacgagggccatcatgaacaatgtgaagaaatgtttgatccaagc
aaggactatgattcaaaacaagctgcactgggcattatggccttaggtaaaggacattct
tcaagtatgctaacacagatggacaggtgtgacatggacatatcagtgagccctgaaatt
tctggtcgaaaaaccttagggaatgtaatctcagttattcagcacacaaactcgataaat
aggcctcactctgaacagtcagaatccttcaagtatcacgggcagagacaggaaagtatt
tcttcatttcaagccatggagacaagtgaatcatatgagatagaaaggagtgatagtaga
ctacggcaatcgtttcaaatgggccccaaacttgtgcggcagcccaacatacaagtccca
gagattagggtcacggtggagcctgacagcccagaaaaagctccagaggtgcaggtgaaa
gagcaagagaagcatgtggaggagtttcagtggcctcaaaggagtgaaactttagcacaa
ttccctccagaaaaactccctccaaagaagaaacggctacgcctagctgatattgagcac
tcctctggtgaatctagttttgagtctgcctgcactagtctctcccgcagtccaagccaa
gacagcaacttatcttacagctccaccttctcctttgacagggaggacagcttgaagtca
gtctctccagctaggcaggatgaatttggcaaaccactagaactcttagctgtgccaggg
agtgggcactccctctctgtgctcaaccagcgtcaacaacatgaaatgagacgctcctct
tcagagcaggcgccgtgtaacttgcgcaaggagttcccagaggtacgcagcatatcattt
gactatggcagtctttctccaacatccaaagttagacacgtggacattagcgctggccac
ttcgctgcgaaggagagaaggaggggaaacttggtgcgacaggagtcattgaatatggac
actgaagtaacacaagtcccatcacaagtgtttccgcagtacctcagcagcacctccccg
ccattcacaacagttgctgttctgccgcagactttgccaatattttccactgggaataca
tttccccagctgtcacatccaagcctgttagttcctgtaagaatacagactcatgtgcca
tcctatggcagtatcacatacacctcagtatcacagatttttgacaatcagtatgacagt
gttagctccactacagccacctctaaacatcacacttcacgtttgtctggaaaccttgat
tctcataatgtattatcttataacagaccaccttcaacgcacaccctcaatgttgaagcc
cttgatttgtcatcagctaagctcaagacaggcatccctctctctctgacttctagaact
atctcaaccactaacgcctccagtggtggcgcaaataaacggatgctatcccctgccagc
agcctagaccttttcatggaggtcaagcaacaaaaacgtgtgaaagaggaaagaatgttt
gggcagattgtagaagagctgagtgctgtggagttgggaaaatgtaatttgagtgaagag
aaggggcacaggtcagagatgcagggtgcatcaacacctgactcacgtaggagtaaattt
atcacacttcagcaaaaagtgacagaggctactgaccatggcgttgagtcagctatggaa
agtagttccctggaaaccagctcgcctccctactccatgatatcagtcagagaagtgaaa
gaagctggcatggaaaaaagagtgcagatggatatggtggcacagctggttaccagtcaa
gacattctgatctcagacgccgagcattcaagactgttatctcagtttccaagtcttcgc
acgacgacaggtgtgagctggtgttacctcaactacaccaagccgagctgctctcacagc
aactcccctttatcctccgtgtacaccacctggtgtgtgagttcccacaaccccaaccct
cttgaactgagcactagcactgctctggctctgctgcgttccagacagaggggagacaag
gttatatacactgtggccgccatgtgtcagcctggcacgggaaaactggtttcatccctc
atcctttggaggcagaccatggaacagctgcagaggaaaccggagcccaaagaggtggac
atcacctacgggaagaaggtgaaagacatcggctgcagagtgaaaactgccaaggaggag
tggaaagagagggaggcttccacaactcaaacagtgccaacacgcattaagatcttcgag
ggagggtacaagtccaatgaagactatgtgtacgtcagaggtcgaggccgggggaaatac
atttgcgaggagtgtggtattcgctgcaagaagccgagcatgctgaaaaaacacatccgg
acccatacagatgtgcgaccatacatctgcagggtctgcaactttgcttttaaaacgaaa
ggaaatctgaccaaacatatgaagtcaaaggcacacatgaagaaatgtctagaactggga
gtgtcagtgacgatggatgacacagagatacaggaacatgttgacgacatccaacaagag
tctaagacagaggtggcggtcacaaccaaacatcagttctcagacgcagacgagtctgat
ggcatggacgaagaagctgatgaaatcgatgaagaagatgacgaggacgacgaatacgaa
ggcgactccactccaaagctacgttcaagaagtacaagtcctcagccatgtggagttact
tctctgtcggttacagccaccgccgccatccacggttgctccctcacctctctgcctggc
accgacatccgccaacagccctctggcaggcggacgggcttagaccatcgacctgtcctc
gccactgaccagagagagaagtctgtggatgaagattcattgaccatgctgtctccagac
cagaccagcttcctatttgacccttattcctcttgtctgctctctcccggctgggagtct
cccatcagggagccttccccttcccgtctgcgctacccatccccaaggcgagaactctcc
ccgcgaggtcgctcctctcccagatgggatacctccccgctgaggcccggctcacccagc
ttcacacccattcagcacttgtccccaatctcgattgagcgacccatgtctcctggatcc
gagctggctggaaaacgagaatcttcaatcaggggtcggcagagggtcgtgctgagagct
gtttcaccacgtagaggttcgcaccaacacaaaggcagcggtgataaaaccagacaccag
gcaaagatggagatggctcaactacaaggagcctttgaaatggaaatggatcaaaggagc
agcttggcttctactctgcctggtgttgccagttctcatcaccagaacatcctcagccac
ctccctctgcactcccagcagcaggcccacagtttgctccccgtcgtccccgtcggaggg
ctccagatgttacactccccgccttcctccagcactgatgtcacctcctcctcggcgctg
agcccccagagcagtgagggccagcgttgcagcagcagggagggatctgtccacgggctc
gagacgggaggagaggacatcagaggccagaaccagctgtcctcccatcaggccgctcag
gagaaaagcctcaaccctggcgtcagggatagcagacaggaggagaacgtccaaacctgc
ttgaaagccatcgcctcgctgaagattaccacagaagaccctcattaa
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integrated database retrieval system
