Lates calcarifer (barramundi perch): 108886756
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Entry
108886756 CDS
T04895
Symbol
si:dkey-220f10.4
Name
(RefSeq) tubby-related protein 3
KO
K19600
tubby and related proteins
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108886756 (si:dkey-220f10.4)
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108886756 (si:dkey-220f10.4)
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108886756 (si:dkey-220f10.4)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
Tubby family proteins
108886756 (si:dkey-220f10.4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
Tub_N
Motif
Other DBs
NCBI-GeneID:
108886756
NCBI-ProteinID:
XP_050922085
UniProt:
A0AAJ8AXE5
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Position
LG23:7252558..7259940
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AA seq
568 aa
AA seq
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MEDPDIRQQKLDNQRTLLMKKQQKKRTDSQMVVANRDARQKNRKHKAVCSDETPLLISQS
LSSASLSDQVEHAHDNPLDEITLGECDMTASMTLEEMPIEKRFTPKKMSLEIDEEPEMKC
DMENDAQVEGKKTKKKDVKKEKSKQVEQNKEKEKEKDKDKEKKEKKTKKKDKVKESEDTQ
KTNKTTKQERQSNISAETKSQEASTPEAESAVEVASPKKNKRDESDDDEEDDGSQRPDPE
SPKKKKQLDTSRCQISEESKDEEVQEKEKKGKKTNKAEKTTPSLASLNSNYRESSSSSSE
SNERSTSPMPLEDLEKFALRPAPRDVTIQCRVTRDRRGVEKGIFPTYYLHMEMEDGKRVF
LMAGRKRKKCKTSNYLISTDATNLSRDTNCYIGKLRSNVLGTKFTVYDGGENPEKKPFIK
ECESVRQELAAICYETNVLGFKGPRKMTVIIPGMLENDERVSIRPKNELETLLVRHTNGN
TDKLVTLVNKSPSWNDQTQSYVLNFHGRVTQASVKNFQIIHPDNDEYIVMQFGRVAEDVF
SMDYSFPMCALQAFAITLSSFDGKLACE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccctgatatacgacaacagaagctggacaaccagcgaacccttttgatgaaa
aagcagcaaaagaagaggactgattctcaaatggtggtagccaatcgcgatgcacgccaa
aagaaccgaaaacacaaagctgtctgctctgatgaaacacccctgttgatcagccaatcc
ttgagcagcgcttccctgagtgatcaagtggaacatgcccatgacaacccactggatgag
atcacactgggtgaatgcgatatgacagcaagtatgacgttagaggagatgcccatagag
aagcggtttactcctaagaaaatgagcttggaaattgacgaagagcctgagatgaagtgt
gacatggagaatgacgcccaggtggagggaaaaaagacaaagaaaaaagacgtgaaaaaa
gaaaaatccaagcaggtggaacagaacaaggagaaggagaaagaaaaggacaaagacaag
gagaaaaaggagaaaaaaacaaagaagaaggacaaagtgaaagaatctgaggacacacaa
aagacaaacaagacaaccaaacaagagcgtcaaagtaacatcagtgctgagacaaagtca
caggaggcttcaactccagaggcagagtcagcggtggaggtggcgagtccaaagaagaat
aaacgtgatgaaagtgacgatgacgaggaggacgatgggtcccagaggcctgaccctgaa
tcgcctaagaaaaaaaaacagctggacacatccaggtgccaaataagcgaggagagcaaa
gacgaggaagtccaggaaaaggagaaaaaggggaaaaagacaaacaaagcagagaaaact
acgccgagtcttgcttcgcttaactccaactacagggagagttcatcctcaagcagcgaa
tctaatgagagatcaacttctcccatgccattggaggatctagagaagtttgctttgcgt
cctgctcctagagacgtaacgatccagtgcagggtcaccagggacaggagaggcgtggag
aagggcattttcccgacttactatctccacatggagatggaggatgggaagagggtgttt
ctgatggctggtagaaaaaggaagaagtgtaaaacatccaactatctaatctccacggat
gcgacaaatctgtccagagacacaaactgctacataggaaaactcaggtccaatgttctg
ggtacaaagttcacagtctatgatggaggagaaaacccagagaaaaaacccttcatcaaa
gagtgtgaatcagtgcggcaagagctggcagcaatttgttatgagacaaacgtgctgggc
ttcaagggtcccaggaagatgacggtgatcatccccggcatgctggagaacgatgaaaga
gtgtccattcgtcccaaaaatgagcttgaaactttgctggtgcgccacacaaacggcaac
acagacaaactggtcaccctggtgaacaaatcccctagctggaatgaccagactcagtct
tatgtgcttaacttccacgggcgcgtcacccaggcttctgtcaagaacttccagatcatc
caccctgacaacgacgagtacatagtgatgcagtttggccgtgtagctgaggacgttttc
tccatggattacagtttccccatgtgtgccctgcaagccttcgccatcaccctgtcgtca
tttgatggcaaactggcctgtgagtga
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