Lates calcarifer (barramundi perch): 108886769
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Entry
108886769 CDS
T04895
Name
(RefSeq) GATOR complex protein WDR24
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108886769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108886769
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
108886769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_WDR75_1st
zf-RING_16
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
108886769
NCBI-ProteinID:
XP_018537307
UniProt:
A0A4W6G2T2
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Position
LG23:complement(7329895..7336792)
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AA seq
789 aa
AA seq
DB search
MEKMSRVTTALSSNAISGRTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYALEEEQFV
EKLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPTEVYMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFA
ASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTN
RAKEIYCVQTIASVARVKWRPERKFHLATCSMMVDHNIYVWDIRRPFIPFATFEEHKDVT
TGIVWRHQHDPHFLLSGSKDSTLYQHMFKDATRPVDKANPEGLCFGLFGDLAFAAKESLI
SSDANRKPYPGGDRRYPIFFFKKPDQTEQFAHVSSALSVFETDLDSNRMDWFVKTAQLYL
LSGKPFAELCDHNAKVARELKRPQVSTTWTMLRIMFSDPANLTTPGPNHNLSKLGTLPLM
NSFSMKEMGSGMGTESRLERSKGESRQDNIHLEPGNMHISNNNEENEETEGSEGQAEYMF
GDAELDDDDLYSMEHDNQTEEQEYTLPQEAFQLRHEIMDNPSAPEHLQQDKADSPHVSGN
EAEVTCLTPIESFSLISISQPLFSPHLPASFFCPIVREMLSYYAEQGDVQMAVSVLIVLG
DRIRKEIDDLTQEHWYMSYIDLLQRFELWNVSNEVIKLSTCSAITCLNQASTTLHINCSN
CKRPMSNKGWICDRCHQCASVCAVCHHVVKGLFVWCQGCSHGGHLEHIMNWLKSSTHCPA
GCGHLCEYT
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgtcacgggttaccacagctctcagcagcaatgccatcagtggccgaact
atgttctgccacttggacgctcctgccaatgccatcagcgtgtgccgtgacgccacacag
gtggtggtggctggccgcaacatcttcaagatctacgcactggaggaggagcagtttgtg
gagaagctgaatctccgtgttggtcgcaaaccctcgctcaacttcagctgtgcggatgta
atgtggcaccagatggaggagaacctgctggccacggctgccaccaatggggcggtggtc
acctggaaccttggaaaaccgtctcgtaacaagcaggaccagctgtttactgagcacaaa
cgcacagtcaacaaggtgtgcttccaccccacagaggtttacatgctgctaagtggctcg
caagatggcttcatgaagtgcttcgacctgcgcaagaaggaatctgtcagcactttctca
ggacagtcagaaagtgtaagggacgtccaattcagcatgaaggattatttcacatttgct
gcgtcctttgagaatggcaacgtccagctgtgggacatcagacggccagaccgctatgag
cgaatgttcactgcccacactggccctgtgttctgctgtgactggcaccctgatgacagg
ggatggctggccacaggaggcagagacaagatggtgaaggtttgggacatgaccaccaac
agggccaaggagatctactgtgtccagacgatcgcctcagtggcacgggtcaagtggcgg
cctgagagaaagtttcatctggccacctgttccatgatggtggaccacaacatctatgtg
tgggacattcgcagacctttcattcccttcgccacctttgaggagcacaaagatgtgacc
actggtattgtgtggcgccaccagcatgaccctcattttctgctttctggctccaaagac
agtacactctaccagcatatgttcaaggacgccactcgtcccgtggacaaggccaaccca
gagggactgtgctttggactgtttggtgacttggcgtttgcagccaaggagagtctgatc
agcagtgatgccaacagaaagccttaccctggaggtgaccgtcgttatcccatctttttc
ttcaagaagcccgaccagacagaacagtttgcccatgtgtccagtgctcttagcgtcttt
gagacagacttggacagtaaccgcatggactggtttgtcaagacagcacaactctacctc
ctcagcgggaagccgtttgctgagctgtgtgatcacaatgccaaggtggcacgggagctc
aaaagacctcaggtttccacaacatggaccatgctgagaatcatgttctctgacccagca
aacctcacaacacccggtccaaaccacaacctcagtaaactgggcactttgcctttaatg
aacagtttcagcatgaaggaaatgggctcagggatgggcacagagagcagactggagcgc
agtaaaggtgagagcagacaggacaacatccacctggagcctggaaacatgcacatcagc
aataataatgaagaaaatgaggagaccgagggcagcgagggccaggctgaatatatgttt
ggtgatgctgagttagatgatgatgacctctactctatggagcacgacaaccaaacagag
gagcaggagtacacgctgccccaggaggccttccagctgcgccacgagatcatggataac
ccctctgcgcccgagcaccttcagcaggacaaggccgactccccacatgtcagcggcaac
gaggcagaggtcacttgtctgacacctatcgagtccttttctctcatttccatttcccag
ccgctgttcagcccgcatctacccgccagcttcttctgccccattgtgcgggagatgctg
agctactacgctgagcagggcgacgtgcagatggccgtgtctgtgcttatcgtcttgggg
gaccggatccgtaaagagattgatgacctcacccaggagcactggtacatgtcctacata
gacctgctgcagcgatttgagctgtggaacgtgtccaatgaggtcatcaagctgagtaca
tgcagcgccatcacctgcctgaaccaggcatctacaacactgcacatcaactgcagcaac
tgcaagcggccaatgagcaacaagggctggatctgtgacaggtgccaccagtgtgccagt
gtatgtgcggtgtgccatcacgtggtgaagggactgtttgtgtggtgtcagggctgcagc
catggcggacatctggagcacataatgaactggctgaaaagcagcacacactgccctgct
ggctgcggtcacctgtgtgagtacacttga
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