Lates calcarifer (barramundi perch): 108886792
Help
Entry
108886792 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: calpain-15
KO
K08582
calpain-15 [EC:3.4.22.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108886792
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C2: calpain family
108886792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
zf-RanBP
DZR
Motif
Other DBs
NCBI-GeneID:
108886792
NCBI-ProteinID:
XP_018537345
LinkDB
All DBs
Position
LG23:8048567..8084379
Genome browser
AA seq
1218 aa
AA seq
DB search
MGSSASSLTAETESDHGFRSTPYPSSPPVGWLRNSHSSPVWGTTFITRQQQHPLPHRERS
HSHSPGSMAAAVRGSEWSCGRCTYLNVGAAPRCSICEAPRQKPDLNQILRLSSTEEHRWA
CPRCTLNNPQGSGACTVCGFGPSPATHTPPTTTIAATANGLPSAPNEPATPAVTPTVLLE
PHGQHPAKEEVLRRSESNGEVGSLEGQHSGWACPRCTLLNTPVALSCSACGGPRKLSLPK
IPPEALVVPEVRTPVLGFPAHTAGAAPLLIDLTDDSPPAPPSDPQEPPHVSAQSLSSPFA
SFSSLQNNPVPRSRREVPPPGRPPNTGTNTPSPTSPSTASVPPQPGPQRPAKPKHAQPQE
PSYPSKRLSILEEEDPQHHPLNPHLPVASSAASTWKCPSCSLPNPGSSSKCEACRSSRAG
ADLIDLVGCETVRFTPASPSSPDFSTWACSKCTLRNPTGAPKCSACGSSKLHGFQEQQVP
LSRCCTHCGLPSGSSTASCSCTPSSSSSSSGHKTRKQTRGYPPSSSAISSNSSTSSSLQE
KAGQWGCPACTLLNDVKAKNCGACHTPQQYLTLRKVVKPLKRRESMHVEARRRNDEGEAK
ELWENIVSFCRENAVNFVDDSFPPGPRSVGFPEGDSVQQRIKKWLRPHEINCSNFKDRGV
KWSVFRTPRPSDILQGLLGNCWFLSALAVLAERPELVERVMITRTICPEGAYQVRLCKDG
TWTTVLVDDMLPCDDYGYLLFSQAQRKQLWVALIEKALAKLHGSYFALQAGRAIEGLATL
TGAPCDSLMLQVSSTNPREEPIDTDLIWAKMLSSKEAGFLMGASCGGGNMKVDDVVYESL
GLRPRHAYSILDVRDVQGYRLLRLRNPWGRFSWNGSWSDEWTDWPQHLRHELMAHGSSEG
VFWMEYTDFIKYFDSVDICKIHSDWQEVRLQGCFPSKASGPVTVTALTVLERTALEFALF
QEGSRRSDTADSHLLDLCIMVFRASFGNGNKLTLGRLLAHSKRAVKKFVGCDVMLEPGEY
AVVCCAFNHWQMNVSGTGGPATPISSPTSGAARRPSQDFPGYILAIYSSRQVMVEQVEAT
ATTLADAIILLTENKGERHEGREGMTCYYLTHGWAGLIVVVENRHPKYYLHVSCDCTDSF
NVVSTRGSLKTIDSVPPLHRQVLVVLSQLEGNAGFSITHRLAHRKAAQASLGDWTPTKAT
HSPQLTPDTDGLHRPRPL
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggggagctcagcctcgtctctcactgcagagacagagtcggaccatggctttcgcagc
accccttacccgtcatcaccccctgtgggctggctcaggaacagccacagcagcccggtg
tggggcaccaccttcatcacacgtcagcagcagcacccacttcctcaccgagagcgcagc
cactctcactcccctggctccatggcagcagcagtgcgaggcagtgagtggtcatgtgga
cgctgcacctacttaaatgtcggcgcagcacctcgctgttccatttgtgaggcaccgcgc
cagaagcctgaccttaaccagatcctgcggctgagcagcactgaggagcatcgctgggcc
tgcccccgctgtaccctcaacaatccccagggatctggagcctgcactgtctgtggtttc
ggaccttcgcctgccactcacacaccccctaccaccaccatagctgccactgccaacggt
ctcccttctgctccgaacgaacctgcaacacccgctgtcacccccacagttctgctcgag
ccccacggacagcatccggccaaggaggaagtgctacgacggtctgagagcaatggagag
gtgggcagcctggaggggcagcactcgggctgggcttgccctcgctgcaccctcctcaac
acacccgtggctctgtcgtgctcagcctgcggtgggcccaggaaactgtctttgcctaaa
atccccccagaggctcttgtggtgcctgaggtgcgcacccctgtgctgggatttcctgct
cacacagcaggagctgccccactacttatagacctaacagatgactctcccccagcccct
ccttctgatcctcaagaacctccccatgtctccgcacagtccctctcctccccgtttgcc
tctttctcctccctccagaacaaccctgttccccgcagcaggagggaggtgcccccccca
gggcgcccgccaaacacaggtaccaacactcccagtcccacttcaccttcaacggccagt
gtgccaccccagccaggcccgcagcggccagccaagcccaaacatgcccaaccccaggaa
ccttcgtaccctagcaagcgcctcagtatcttggaggaagaagaccctcagcatcacccg
ctgaacccccacctgcctgttgcttcctcagcagcctccacctggaagtgccctagttgc
tcattgcccaacccaggtagctcctctaagtgcgaggcctgccgatcatcgcgggctggc
gctgacctcattgatcttgtgggctgcgagacagtacgatttaccccagccagcccctcc
agcccggactttagcacctgggcctgctccaagtgcacgctgcgcaaccctactggggcc
cccaagtgctcagcctgtggttcttccaaactgcatggctttcaggagcagcaggtgccc
ctgtcccgctgctgtacacactgtggcctcccgtcggggtccagtaccgcatcctgctcc
tgcacaccttcctcctcttcatcctcctcaggtcataaaacacggaaacagacccggggc
taccctccctcctcctctgctatttcttccaattcctccacctcatcaagccttcaagaa
aaggccgggcagtggggctgcccggcatgtacgctgctcaatgacgtcaaggccaagaac
tgtggagcgtgccacacaccccagcagtacctcacccttcgcaaagtggtgaagcctctg
aagaggagagagagcatgcatgtggaggcccgtcgacgaaatgatgagggcgaggccaag
gagctctgggagaacatagtcagcttctgcagagagaacgctgtgaactttgtggatgac
agtttccccccgggaccacgctccgtgggcttcccagagggtgacagcgtccagcagcga
atcaaaaagtggctgcgcccccacgagatcaactgcagcaacttcaaagaccgaggcgtg
aagtggtccgtcttccgcacgccgcggccctccgacatcctgcagggtctgctcggaaac
tgctggttcctgagcgcgctggcggtgctggcagagcgtccagagctggtggagagggtg
atgatcacccggaccatctgcccggaaggggcctaccaggtccggttatgtaaagacggg
acatggacgacagtactggtggacgacatgctgccctgcgatgattacggctacctcctc
ttctcccaggcccagaggaagcagctgtgggtggcactaattgagaaggccctggccaaa
ctccacggctcctacttcgccctgcaggcggggcgcgccatcgagggcctggccacgctg
acaggggctccctgcgactccctcatgctccaggtcagctccaccaacccccgggaggaa
cccatcgatacggacctcatttgggctaagatgctcagctctaaggaggcagggtttctg
atgggtgcatcttgtggaggaggcaacatgaaggtggatgacgtcgtctacgagtctctg
ggtctgcggcctcgacatgcgtattccatcttggacgtacgggatgtccagggttacagg
ttgctgcggctgcgtaacccgtggggtcgcttctcatggaatggcagctggtcggacgag
tggacagactggccgcaacacctgcgtcatgagctgatggctcatggcagcagcgagggg
gtcttctggatggagtacaccgacttcataaagtactttgactcggttgacatctgtaag
atccactcagactggcaggaggtgaggctacagggctgcttccccagcaaggccagcggg
ccagtcaccgttacagccctcaccgtgctggagaggacagcgctggagttcgctctcttc
caggaaggaagcagacgttcagacacggctgacagccacctgctggacctgtgcatcatg
gtgtttcgcgcgtccttcggcaacggcaacaagctgaccctgggccgcctgctggcccac
agcaagcgggcggtgaagaagtttgtcggctgcgatgtgatgctggagccgggagagtac
gccgtcgtctgctgcgccttcaaccactggcagatgaatgtcagcgggacaggaggtcca
gccacacccatctcaagccctaccagcggagcagcgcggcggcccagccaggacttcccg
ggctacatccttgccatctatagctccaggcaggtgatggtggagcaggtggaggcgacc
gccaccacgttggccgacgccatcatcctccttacagaaaacaaaggggaaagacacgag
ggccgtgaaggcatgacatgctactacctgacccacggctgggcggggcttatcgtggtg
gtggaaaaccgccaccctaaatactacctccacgtctcctgcgactgcactgacagcttc
aatgtggtgtcaacacgcggcagcctcaagaccatcgacagcgtaccgcctttgcacagg
caggtgctggtggtgctctcacagctggaaggaaatgctggcttttctatcacacaccgc
ctggctcaccgcaaggccgcccaagcctctttgggagactggaccccgactaaagccacc
cacagcccgcagctcaccccagacactgatggcctgcaccggcccaggccactatga
DBGET
integrated database retrieval system
