Lates calcarifer (barramundi perch): 108886795
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Entry
108886795 CDS
T04895
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecule (CAM) interaction
lcf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108886795 (lrrc4bb)
04517 IgSF CAM signaling
108886795 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108886795 (lrrc4bb)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
NGL family
108886795 (lrrc4bb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
LRRNT
Ig_2
VEGFR1-3_N_Ig-like
Ig_6
LRR_NXF1-5
DUF7617
Motif
Other DBs
NCBI-GeneID:
108886795
NCBI-ProteinID:
XP_018537349
UniProt:
A0A4W6BJZ3
LinkDB
All DBs
Position
LG23:8149905..8161088
Genome browser
AA seq
744 aa
AA seq
DB search
MRVVMVTSPCTPSPLLWLVQLLLWFHNHGPQLTEAAPACPTPCTCSNQASRVICTRKSLD
QVPDSISENTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVETVETVRGEEENSARQYINETFIDFPNP
TVQRGVLEARPGITISPSLSSLSSLSPRANRPTENTVTVSIMDVTNIPGLDDVMKTTKII
IGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTM
NSGTGGEGTLRIHHPEIVNLPNIGRTDTLNHYYKTHHFNNNVMGLSIGTEGMGPGGILKN
QQGQDIPISCTSVPISTSNLLTTSGNGTNTNPSSMSPPLPMSLPMPTMGLHGSIKGFMGQ
NQNPQMEPLLFKGSSKENVQETQI
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgtaccccttcccccctcctctggttggtccag
cttttgttgtggtttcacaaccatggacctcagctcacagaggcagcacccgcctgcccc
accccctgtacctgctctaatcaggcgagccgtgtcatctgtacaaggaagagtttagat
caagttccagatagtatttcggagaacacaagatacctcaatctacaagagaacacaatt
caggtgatcaagtctgacacatttaagcacctgcggcatttggaaatcctccagctctcc
aagaaccacatccgacagattgaggtgggagctttcaatggccttcccaaccttaatacg
ctggagctttttgacaaccgtctcaccgtggtaccatcacaagcctttgagtacctcagc
aagctaagggaactatggctacgaaacaaccccatcgagacgctgccggcatttgccttt
caccgtgttccctctttgcgccgtctcgacctaggggaactcaggaagttggatttcatc
tcagaggctgcctttgaaggtctggtaaatttgcgcttcttgaatcttggcatgtgtggc
ttgaaggacatccctaacctcaccccactagtacgactagaggagttggagttgtcaggg
aaccagctgggtattgtccggcctggatccttccaaggcctagtgtcacttcgcaagctg
tggctaatgcactccagagtgtcagtcatcgaacgcaatgcttttgatgacctcaaaaac
ctggaggagctcaacctctcccacaattccctgcattccctgccccatgacctcttcacc
cctctgcaccagttggagagggtacatctcaaccacaacccttgggtgtgcaactgtgac
gttctgtggctcagctggtggctgaaagaaacagttcccagcaacactacatgttgtgct
cgctgccatgcgcccccaggtctaaagggcaagtacattggtgaactagaccagagccac
tttacctgctatgccccagtcattgttgagccacccactgacctcaatgtcactgagggc
atggctgctgagctgaaatgtcgtactggaacctcaatgacctctgtgaattggttcact
ccaaatggcaccctgatgacccacggatcataccgagttaggatctcagtgcttcatgac
ggaacactgaacttcacaaatgtgaccgtgcaagacactggacagtacacttgcatggta
accaactcagctggaaacaccactgcaaccgccgtgctcaatgtgtctgcttcagacccc
agcaacagctacagttatttcaccactgtcactgtggaaacagtggagacagtaagggga
gaggaggagaactcggcaagacagtatattaacgagaccttcatagatttccctaatcct
acggtccaaagaggggtgttagaggccagacctggcatcactatatcgccttctctctct
tctctttcttcactgtccccacgagccaacagacccactgaaaacacagtgactgtgtcc
attatggatgtaactaacattccaggcttggatgatgtaatgaaaaccactaagatcatc
attggttgctttgtggccatcacttttatggcagctgtaatgttggtggtcttctataaa
ctccggaagcagcaccagctacacaagcaccatggcccagccagagccattgaaattgtc
aatgtggaagatgagatcggagccggggctggaagtggcatttcaggtggttcaactatg
aattctggcacaggtggtgaaggaaccctaaggatacatcacccggaaatagtcaatctt
cccaacattggccgcacagatactctaaaccattactataagacccatcatttcaacaac
aatgtgatgggtcttagtattggcaccgaagggatgggaccaggagggatcctcaagaac
cagcaaggccaggatattcccatctcctgtacctcagtcccaatctctacatctaatttg
ctcaccacatcaggcaatggcaccaacaccaaccccagttctatgtccccaccgctgcca
atgtctctccccatgcctactatgggcttacatggatcgatcaagggtttcatgggccaa
aaccagaatccccaaatggagcctcttctcttcaaggggagctcgaaggaaaacgttcaa
gagactcagatctaa
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